Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14362 | 43309;43310;43311 | chr2:178633189;178633188;178633187 | chr2:179497916;179497915;179497914 |
N2AB | 12721 | 38386;38387;38388 | chr2:178633189;178633188;178633187 | chr2:179497916;179497915;179497914 |
N2A | 11794 | 35605;35606;35607 | chr2:178633189;178633188;178633187 | chr2:179497916;179497915;179497914 |
N2B | 5297 | 16114;16115;16116 | chr2:178633189;178633188;178633187 | chr2:179497916;179497915;179497914 |
Novex-1 | 5422 | 16489;16490;16491 | chr2:178633189;178633188;178633187 | chr2:179497916;179497915;179497914 |
Novex-2 | 5489 | 16690;16691;16692 | chr2:178633189;178633188;178633187 | chr2:179497916;179497915;179497914 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.993 | N | 0.563 | 0.384 | 0.458917189328 | gnomAD-4.0.0 | 1.59968E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87579E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0882 | likely_benign | 0.0766 | benign | -0.169 | Destabilizing | 0.355 | N | 0.378 | neutral | N | 0.434062786 | None | None | N |
P/C | 0.6729 | likely_pathogenic | 0.6095 | pathogenic | -0.527 | Destabilizing | 1.0 | D | 0.7 | prob.delet. | None | None | None | None | N |
P/D | 0.3808 | ambiguous | 0.3012 | benign | -0.318 | Destabilizing | 0.995 | D | 0.594 | neutral | None | None | None | None | N |
P/E | 0.2425 | likely_benign | 0.2 | benign | -0.452 | Destabilizing | 0.995 | D | 0.585 | neutral | None | None | None | None | N |
P/F | 0.6589 | likely_pathogenic | 0.5723 | pathogenic | -0.644 | Destabilizing | 1.0 | D | 0.642 | neutral | None | None | None | None | N |
P/G | 0.3807 | ambiguous | 0.3074 | benign | -0.226 | Destabilizing | 0.982 | D | 0.452 | neutral | None | None | None | None | N |
P/H | 0.2232 | likely_benign | 0.1992 | benign | 0.09 | Stabilizing | 1.0 | D | 0.544 | neutral | N | 0.503370876 | None | None | N |
P/I | 0.4101 | ambiguous | 0.3461 | ambiguous | -0.174 | Destabilizing | 0.997 | D | 0.701 | prob.delet. | None | None | None | None | N |
P/K | 0.236 | likely_benign | 0.1927 | benign | -0.203 | Destabilizing | 0.995 | D | 0.579 | neutral | None | None | None | None | N |
P/L | 0.1633 | likely_benign | 0.141 | benign | -0.174 | Destabilizing | 0.993 | D | 0.563 | neutral | N | 0.505307563 | None | None | N |
P/M | 0.4082 | ambiguous | 0.3413 | ambiguous | -0.319 | Destabilizing | 1.0 | D | 0.547 | neutral | None | None | None | None | N |
P/N | 0.3676 | ambiguous | 0.2939 | benign | 0.082 | Stabilizing | 0.995 | D | 0.631 | neutral | None | None | None | None | N |
P/Q | 0.1719 | likely_benign | 0.1445 | benign | -0.174 | Destabilizing | 0.997 | D | 0.485 | neutral | None | None | None | None | N |
P/R | 0.1636 | likely_benign | 0.1442 | benign | 0.262 | Stabilizing | 0.997 | D | 0.593 | neutral | N | 0.483677505 | None | None | N |
P/S | 0.1337 | likely_benign | 0.1108 | benign | -0.199 | Destabilizing | 0.787 | D | 0.365 | neutral | N | 0.412387068 | None | None | N |
P/T | 0.1175 | likely_benign | 0.0996 | benign | -0.244 | Destabilizing | 0.976 | D | 0.622 | neutral | D | 0.523350325 | None | None | N |
P/V | 0.289 | likely_benign | 0.2469 | benign | -0.142 | Destabilizing | 0.995 | D | 0.457 | neutral | None | None | None | None | N |
P/W | 0.7631 | likely_pathogenic | 0.6849 | pathogenic | -0.721 | Destabilizing | 1.0 | D | 0.737 | deleterious | None | None | None | None | N |
P/Y | 0.5958 | likely_pathogenic | 0.5128 | ambiguous | -0.41 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.