Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14366 | 43321;43322;43323 | chr2:178633035;178633034;178633033 | chr2:179497762;179497761;179497760 |
N2AB | 12725 | 38398;38399;38400 | chr2:178633035;178633034;178633033 | chr2:179497762;179497761;179497760 |
N2A | 11798 | 35617;35618;35619 | chr2:178633035;178633034;178633033 | chr2:179497762;179497761;179497760 |
N2B | 5301 | 16126;16127;16128 | chr2:178633035;178633034;178633033 | chr2:179497762;179497761;179497760 |
Novex-1 | 5426 | 16501;16502;16503 | chr2:178633035;178633034;178633033 | chr2:179497762;179497761;179497760 |
Novex-2 | 5493 | 16702;16703;16704 | chr2:178633035;178633034;178633033 | chr2:179497762;179497761;179497760 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.264 | N | 0.336 | 0.164 | 0.426084969639 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8748 | likely_pathogenic | 0.8493 | pathogenic | -2.204 | Highly Destabilizing | 0.841 | D | 0.596 | neutral | None | None | None | None | N |
I/C | 0.9439 | likely_pathogenic | 0.9423 | pathogenic | -1.213 | Destabilizing | 0.998 | D | 0.661 | prob.neutral | None | None | None | None | N |
I/D | 0.9682 | likely_pathogenic | 0.964 | pathogenic | -2.155 | Highly Destabilizing | 0.991 | D | 0.797 | deleterious | None | None | None | None | N |
I/E | 0.9007 | likely_pathogenic | 0.8833 | pathogenic | -2.05 | Highly Destabilizing | 0.974 | D | 0.803 | deleterious | None | None | None | None | N |
I/F | 0.3192 | likely_benign | 0.2911 | benign | -1.412 | Destabilizing | 0.933 | D | 0.521 | neutral | N | 0.474267842 | None | None | N |
I/G | 0.9623 | likely_pathogenic | 0.9556 | pathogenic | -2.635 | Highly Destabilizing | 0.974 | D | 0.792 | deleterious | None | None | None | None | N |
I/H | 0.8933 | likely_pathogenic | 0.8883 | pathogenic | -1.98 | Destabilizing | 0.998 | D | 0.767 | deleterious | None | None | None | None | N |
I/K | 0.7677 | likely_pathogenic | 0.7725 | pathogenic | -1.708 | Destabilizing | 0.949 | D | 0.791 | deleterious | None | None | None | None | N |
I/L | 0.2653 | likely_benign | 0.2408 | benign | -1.019 | Destabilizing | 0.11 | N | 0.205 | neutral | N | 0.416855006 | None | None | N |
I/M | 0.1264 | likely_benign | 0.1275 | benign | -0.71 | Destabilizing | 0.134 | N | 0.258 | neutral | N | 0.437972818 | None | None | N |
I/N | 0.7051 | likely_pathogenic | 0.7108 | pathogenic | -1.66 | Destabilizing | 0.966 | D | 0.805 | deleterious | D | 0.614264342 | None | None | N |
I/P | 0.9805 | likely_pathogenic | 0.9763 | pathogenic | -1.389 | Destabilizing | 0.991 | D | 0.797 | deleterious | None | None | None | None | N |
I/Q | 0.8379 | likely_pathogenic | 0.8292 | pathogenic | -1.719 | Destabilizing | 0.974 | D | 0.807 | deleterious | None | None | None | None | N |
I/R | 0.7217 | likely_pathogenic | 0.7261 | pathogenic | -1.19 | Destabilizing | 0.974 | D | 0.798 | deleterious | None | None | None | None | N |
I/S | 0.8185 | likely_pathogenic | 0.8092 | pathogenic | -2.269 | Highly Destabilizing | 0.966 | D | 0.726 | deleterious | N | 0.50289534 | None | None | N |
I/T | 0.7221 | likely_pathogenic | 0.6984 | pathogenic | -2.044 | Highly Destabilizing | 0.799 | D | 0.663 | prob.neutral | D | 0.571317044 | None | None | N |
I/V | 0.1912 | likely_benign | 0.1718 | benign | -1.389 | Destabilizing | 0.264 | N | 0.336 | neutral | N | 0.452019276 | None | None | N |
I/W | 0.9115 | likely_pathogenic | 0.9058 | pathogenic | -1.68 | Destabilizing | 0.998 | D | 0.761 | deleterious | None | None | None | None | N |
I/Y | 0.7166 | likely_pathogenic | 0.7204 | pathogenic | -1.431 | Destabilizing | 0.974 | D | 0.647 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.