Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14371 | 43336;43337;43338 | chr2:178633020;178633019;178633018 | chr2:179497747;179497746;179497745 |
N2AB | 12730 | 38413;38414;38415 | chr2:178633020;178633019;178633018 | chr2:179497747;179497746;179497745 |
N2A | 11803 | 35632;35633;35634 | chr2:178633020;178633019;178633018 | chr2:179497747;179497746;179497745 |
N2B | 5306 | 16141;16142;16143 | chr2:178633020;178633019;178633018 | chr2:179497747;179497746;179497745 |
Novex-1 | 5431 | 16516;16517;16518 | chr2:178633020;178633019;178633018 | chr2:179497747;179497746;179497745 |
Novex-2 | 5498 | 16717;16718;16719 | chr2:178633020;178633019;178633018 | chr2:179497747;179497746;179497745 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/M | rs757765087 | 0.152 | 0.8 | N | 0.404 | 0.211 | 0.243972157842 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/M | rs757765087 | 0.152 | 0.8 | N | 0.404 | 0.211 | 0.243972157842 | gnomAD-4.0.0 | 1.59299E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43349E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.786 | likely_pathogenic | 0.6702 | pathogenic | -0.604 | Destabilizing | 0.004 | N | 0.154 | neutral | None | None | None | None | N |
K/C | 0.8905 | likely_pathogenic | 0.8428 | pathogenic | -0.61 | Destabilizing | 0.984 | D | 0.429 | neutral | None | None | None | None | N |
K/D | 0.8907 | likely_pathogenic | 0.7811 | pathogenic | -0.44 | Destabilizing | 0.428 | N | 0.448 | neutral | None | None | None | None | N |
K/E | 0.5203 | ambiguous | 0.3977 | ambiguous | -0.323 | Destabilizing | 0.104 | N | 0.403 | neutral | D | 0.527160786 | None | None | N |
K/F | 0.9639 | likely_pathogenic | 0.9352 | pathogenic | -0.225 | Destabilizing | 0.942 | D | 0.451 | neutral | None | None | None | None | N |
K/G | 0.7712 | likely_pathogenic | 0.6335 | pathogenic | -0.989 | Destabilizing | 0.272 | N | 0.411 | neutral | None | None | None | None | N |
K/H | 0.6608 | likely_pathogenic | 0.5569 | ambiguous | -1.372 | Destabilizing | 0.842 | D | 0.405 | neutral | None | None | None | None | N |
K/I | 0.8522 | likely_pathogenic | 0.7834 | pathogenic | 0.403 | Stabilizing | 0.842 | D | 0.479 | neutral | None | None | None | None | N |
K/L | 0.7234 | likely_pathogenic | 0.6609 | pathogenic | 0.403 | Stabilizing | 0.428 | N | 0.444 | neutral | None | None | None | None | N |
K/M | 0.5756 | likely_pathogenic | 0.4955 | ambiguous | 0.356 | Stabilizing | 0.8 | D | 0.404 | neutral | N | 0.469187063 | None | None | N |
K/N | 0.6921 | likely_pathogenic | 0.5617 | ambiguous | -0.674 | Destabilizing | 0.361 | N | 0.405 | neutral | N | 0.416850722 | None | None | N |
K/P | 0.9101 | likely_pathogenic | 0.8328 | pathogenic | 0.098 | Stabilizing | 0.002 | N | 0.269 | neutral | None | None | None | None | N |
K/Q | 0.31 | likely_benign | 0.2478 | benign | -0.74 | Destabilizing | 0.008 | N | 0.213 | neutral | N | 0.465876024 | None | None | N |
K/R | 0.1045 | likely_benign | 0.1002 | benign | -0.802 | Destabilizing | 0.22 | N | 0.423 | neutral | N | 0.436892645 | None | None | N |
K/S | 0.7774 | likely_pathogenic | 0.6529 | pathogenic | -1.281 | Destabilizing | 0.134 | N | 0.329 | neutral | None | None | None | None | N |
K/T | 0.5575 | ambiguous | 0.4533 | ambiguous | -0.958 | Destabilizing | 0.361 | N | 0.423 | neutral | N | 0.432506033 | None | None | N |
K/V | 0.8119 | likely_pathogenic | 0.7473 | pathogenic | 0.098 | Stabilizing | 0.428 | N | 0.415 | neutral | None | None | None | None | N |
K/W | 0.9451 | likely_pathogenic | 0.9105 | pathogenic | -0.128 | Destabilizing | 0.984 | D | 0.551 | neutral | None | None | None | None | N |
K/Y | 0.9068 | likely_pathogenic | 0.8367 | pathogenic | 0.163 | Stabilizing | 0.842 | D | 0.469 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.