Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14373 | 43342;43343;43344 | chr2:178633014;178633013;178633012 | chr2:179497741;179497740;179497739 |
N2AB | 12732 | 38419;38420;38421 | chr2:178633014;178633013;178633012 | chr2:179497741;179497740;179497739 |
N2A | 11805 | 35638;35639;35640 | chr2:178633014;178633013;178633012 | chr2:179497741;179497740;179497739 |
N2B | 5308 | 16147;16148;16149 | chr2:178633014;178633013;178633012 | chr2:179497741;179497740;179497739 |
Novex-1 | 5433 | 16522;16523;16524 | chr2:178633014;178633013;178633012 | chr2:179497741;179497740;179497739 |
Novex-2 | 5500 | 16723;16724;16725 | chr2:178633014;178633013;178633012 | chr2:179497741;179497740;179497739 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/N | rs1216345717 | None | 0.997 | D | 0.596 | 0.42 | 0.286081765059 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
H/N | rs1216345717 | None | 0.997 | D | 0.596 | 0.42 | 0.286081765059 | gnomAD-4.0.0 | 6.57557E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47093E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.9838 | likely_pathogenic | 0.9722 | pathogenic | -2.126 | Highly Destabilizing | 0.998 | D | 0.731 | deleterious | None | None | None | None | N |
H/C | 0.8269 | likely_pathogenic | 0.783 | pathogenic | -1.223 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
H/D | 0.9843 | likely_pathogenic | 0.9769 | pathogenic | -2.169 | Highly Destabilizing | 0.999 | D | 0.774 | deleterious | D | 0.619840274 | None | None | N |
H/E | 0.9876 | likely_pathogenic | 0.9778 | pathogenic | -1.925 | Destabilizing | 0.998 | D | 0.566 | neutral | None | None | None | None | N |
H/F | 0.9004 | likely_pathogenic | 0.8812 | pathogenic | -0.113 | Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | N |
H/G | 0.9834 | likely_pathogenic | 0.9773 | pathogenic | -2.562 | Highly Destabilizing | 0.998 | D | 0.761 | deleterious | None | None | None | None | N |
H/I | 0.9716 | likely_pathogenic | 0.9626 | pathogenic | -0.787 | Destabilizing | 0.999 | D | 0.854 | deleterious | None | None | None | None | N |
H/K | 0.9685 | likely_pathogenic | 0.9379 | pathogenic | -1.003 | Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | N |
H/L | 0.8552 | likely_pathogenic | 0.8282 | pathogenic | -0.787 | Destabilizing | 0.999 | D | 0.84 | deleterious | D | 0.575106481 | None | None | N |
H/M | 0.9648 | likely_pathogenic | 0.9577 | pathogenic | -1.05 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
H/N | 0.8047 | likely_pathogenic | 0.7644 | pathogenic | -2.062 | Highly Destabilizing | 0.997 | D | 0.596 | neutral | D | 0.619840274 | None | None | N |
H/P | 0.9894 | likely_pathogenic | 0.9882 | pathogenic | -1.23 | Destabilizing | 0.999 | D | 0.843 | deleterious | D | 0.619840274 | None | None | N |
H/Q | 0.9394 | likely_pathogenic | 0.8867 | pathogenic | -1.613 | Destabilizing | 0.999 | D | 0.805 | deleterious | N | 0.478675707 | None | None | N |
H/R | 0.9176 | likely_pathogenic | 0.8233 | pathogenic | -1.054 | Destabilizing | 0.999 | D | 0.761 | deleterious | N | 0.444895962 | None | None | N |
H/S | 0.9659 | likely_pathogenic | 0.9507 | pathogenic | -2.279 | Highly Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
H/T | 0.9835 | likely_pathogenic | 0.9765 | pathogenic | -1.899 | Destabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | N |
H/V | 0.9671 | likely_pathogenic | 0.9559 | pathogenic | -1.23 | Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
H/W | 0.9181 | likely_pathogenic | 0.9014 | pathogenic | 0.624 | Stabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
H/Y | 0.6064 | likely_pathogenic | 0.5556 | ambiguous | 0.271 | Stabilizing | 0.997 | D | 0.613 | neutral | D | 0.540266218 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.