Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14382 | 43369;43370;43371 | chr2:178632987;178632986;178632985 | chr2:179497714;179497713;179497712 |
N2AB | 12741 | 38446;38447;38448 | chr2:178632987;178632986;178632985 | chr2:179497714;179497713;179497712 |
N2A | 11814 | 35665;35666;35667 | chr2:178632987;178632986;178632985 | chr2:179497714;179497713;179497712 |
N2B | 5317 | 16174;16175;16176 | chr2:178632987;178632986;178632985 | chr2:179497714;179497713;179497712 |
Novex-1 | 5442 | 16549;16550;16551 | chr2:178632987;178632986;178632985 | chr2:179497714;179497713;179497712 |
Novex-2 | 5509 | 16750;16751;16752 | chr2:178632987;178632986;178632985 | chr2:179497714;179497713;179497712 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/Q | None | None | 0.988 | D | 0.641 | 0.457 | 0.575880570741 | gnomAD-4.0.0 | 1.59257E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86074E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2183 | likely_benign | 0.1918 | benign | -1.125 | Destabilizing | 0.938 | D | 0.471 | neutral | None | None | None | None | N |
L/C | 0.7427 | likely_pathogenic | 0.7019 | pathogenic | -0.765 | Destabilizing | 0.999 | D | 0.448 | neutral | None | None | None | None | N |
L/D | 0.6332 | likely_pathogenic | 0.5867 | pathogenic | -0.424 | Destabilizing | 0.997 | D | 0.727 | deleterious | None | None | None | None | N |
L/E | 0.2809 | likely_benign | 0.2541 | benign | -0.491 | Destabilizing | 0.997 | D | 0.713 | prob.delet. | None | None | None | None | N |
L/F | 0.2577 | likely_benign | 0.2158 | benign | -0.946 | Destabilizing | 0.991 | D | 0.417 | neutral | None | None | None | None | N |
L/G | 0.6118 | likely_pathogenic | 0.5447 | ambiguous | -1.349 | Destabilizing | 0.991 | D | 0.696 | prob.delet. | None | None | None | None | N |
L/H | 0.3274 | likely_benign | 0.298 | benign | -0.552 | Destabilizing | 0.999 | D | 0.758 | deleterious | None | None | None | None | N |
L/I | 0.1042 | likely_benign | 0.0935 | benign | -0.632 | Destabilizing | 0.757 | D | 0.373 | neutral | None | None | None | None | N |
L/K | 0.2834 | likely_benign | 0.2632 | benign | -0.654 | Destabilizing | 0.991 | D | 0.529 | neutral | None | None | None | None | N |
L/M | 0.1694 | likely_benign | 0.1463 | benign | -0.508 | Destabilizing | 0.506 | D | 0.422 | neutral | N | 0.438986668 | None | None | N |
L/N | 0.4242 | ambiguous | 0.3914 | ambiguous | -0.42 | Destabilizing | 0.997 | D | 0.745 | deleterious | None | None | None | None | N |
L/P | 0.1882 | likely_benign | 0.1659 | benign | -0.762 | Destabilizing | 0.996 | D | 0.72 | deleterious | N | 0.437427935 | None | None | N |
L/Q | 0.1933 | likely_benign | 0.1797 | benign | -0.664 | Destabilizing | 0.988 | D | 0.641 | neutral | D | 0.546790564 | None | None | N |
L/R | 0.2466 | likely_benign | 0.2182 | benign | -0.039 | Destabilizing | 0.988 | D | 0.647 | neutral | N | 0.416400984 | None | None | N |
L/S | 0.2993 | likely_benign | 0.2605 | benign | -0.967 | Destabilizing | 0.991 | D | 0.492 | neutral | None | None | None | None | N |
L/T | 0.1982 | likely_benign | 0.1791 | benign | -0.923 | Destabilizing | 0.938 | D | 0.491 | neutral | None | None | None | None | N |
L/V | 0.1186 | likely_benign | 0.1082 | benign | -0.762 | Destabilizing | 0.06 | N | 0.197 | neutral | N | 0.435933819 | None | None | N |
L/W | 0.4443 | ambiguous | 0.3875 | ambiguous | -0.933 | Destabilizing | 0.999 | D | 0.733 | deleterious | None | None | None | None | N |
L/Y | 0.5105 | ambiguous | 0.4588 | ambiguous | -0.707 | Destabilizing | 0.997 | D | 0.38 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.