Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14387 | 43384;43385;43386 | chr2:178632972;178632971;178632970 | chr2:179497699;179497698;179497697 |
N2AB | 12746 | 38461;38462;38463 | chr2:178632972;178632971;178632970 | chr2:179497699;179497698;179497697 |
N2A | 11819 | 35680;35681;35682 | chr2:178632972;178632971;178632970 | chr2:179497699;179497698;179497697 |
N2B | 5322 | 16189;16190;16191 | chr2:178632972;178632971;178632970 | chr2:179497699;179497698;179497697 |
Novex-1 | 5447 | 16564;16565;16566 | chr2:178632972;178632971;178632970 | chr2:179497699;179497698;179497697 |
Novex-2 | 5514 | 16765;16766;16767 | chr2:178632972;178632971;178632970 | chr2:179497699;179497698;179497697 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.104 | N | 0.609 | 0.163 | 0.183819452728 | gnomAD-4.0.0 | 1.59251E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86079E-06 | 0 | 0 |
E/Q | None | None | 0.007 | N | 0.267 | 0.064 | 0.139678290688 | gnomAD-4.0.0 | 6.84439E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99717E-07 | 0 | 0 |
E/V | rs749959242 | 0.009 | 0.449 | N | 0.665 | 0.239 | 0.30921473904 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
E/V | rs749959242 | 0.009 | 0.449 | N | 0.665 | 0.239 | 0.30921473904 | gnomAD-4.0.0 | 4.77754E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.58236E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.233 | likely_benign | 0.2343 | benign | -0.611 | Destabilizing | 0.104 | N | 0.609 | neutral | N | 0.435532453 | None | None | N |
E/C | 0.9399 | likely_pathogenic | 0.9464 | pathogenic | -0.024 | Destabilizing | 0.962 | D | 0.649 | prob.neutral | None | None | None | None | N |
E/D | 0.2292 | likely_benign | 0.225 | benign | -0.825 | Destabilizing | 0.189 | N | 0.496 | neutral | N | 0.495490775 | None | None | N |
E/F | 0.8818 | likely_pathogenic | 0.8811 | pathogenic | -0.739 | Destabilizing | 0.962 | D | 0.697 | prob.delet. | None | None | None | None | N |
E/G | 0.3817 | ambiguous | 0.4104 | ambiguous | -0.862 | Destabilizing | 0.449 | N | 0.638 | neutral | N | 0.440025561 | None | None | N |
E/H | 0.7106 | likely_pathogenic | 0.7034 | pathogenic | -0.97 | Destabilizing | 0.892 | D | 0.623 | neutral | None | None | None | None | N |
E/I | 0.4438 | ambiguous | 0.4223 | ambiguous | 0.035 | Stabilizing | 0.687 | D | 0.758 | deleterious | None | None | None | None | N |
E/K | 0.1733 | likely_benign | 0.1678 | benign | 0.02 | Stabilizing | 0.001 | N | 0.281 | neutral | N | 0.463380104 | None | None | N |
E/L | 0.568 | likely_pathogenic | 0.5446 | ambiguous | 0.035 | Stabilizing | 0.519 | D | 0.648 | neutral | None | None | None | None | N |
E/M | 0.5349 | ambiguous | 0.5178 | ambiguous | 0.483 | Stabilizing | 0.892 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/N | 0.4092 | ambiguous | 0.3982 | ambiguous | -0.25 | Destabilizing | 0.519 | D | 0.603 | neutral | None | None | None | None | N |
E/P | 0.6858 | likely_pathogenic | 0.6786 | pathogenic | -0.16 | Destabilizing | 0.687 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/Q | 0.2303 | likely_benign | 0.2217 | benign | -0.233 | Destabilizing | 0.007 | N | 0.267 | neutral | N | 0.447370046 | None | None | N |
E/R | 0.3616 | ambiguous | 0.3583 | ambiguous | 0.019 | Stabilizing | 0.134 | N | 0.59 | neutral | None | None | None | None | N |
E/S | 0.3569 | ambiguous | 0.36 | ambiguous | -0.474 | Destabilizing | 0.134 | N | 0.493 | neutral | None | None | None | None | N |
E/T | 0.3002 | likely_benign | 0.2828 | benign | -0.268 | Destabilizing | 0.519 | D | 0.696 | prob.delet. | None | None | None | None | N |
E/V | 0.2873 | likely_benign | 0.2765 | benign | -0.16 | Destabilizing | 0.449 | N | 0.665 | prob.neutral | N | 0.410979012 | None | None | N |
E/W | 0.9608 | likely_pathogenic | 0.9612 | pathogenic | -0.656 | Destabilizing | 0.962 | D | 0.641 | neutral | None | None | None | None | N |
E/Y | 0.8212 | likely_pathogenic | 0.8237 | pathogenic | -0.498 | Destabilizing | 0.687 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.