Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14388 | 43387;43388;43389 | chr2:178632969;178632968;178632967 | chr2:179497696;179497695;179497694 |
N2AB | 12747 | 38464;38465;38466 | chr2:178632969;178632968;178632967 | chr2:179497696;179497695;179497694 |
N2A | 11820 | 35683;35684;35685 | chr2:178632969;178632968;178632967 | chr2:179497696;179497695;179497694 |
N2B | 5323 | 16192;16193;16194 | chr2:178632969;178632968;178632967 | chr2:179497696;179497695;179497694 |
Novex-1 | 5448 | 16567;16568;16569 | chr2:178632969;178632968;178632967 | chr2:179497696;179497695;179497694 |
Novex-2 | 5515 | 16768;16769;16770 | chr2:178632969;178632968;178632967 | chr2:179497696;179497695;179497694 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.449 | N | 0.808 | 0.172 | 0.335910606209 | gnomAD-4.0.0 | 6.84448E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52398E-05 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs1385503559 | -0.038 | 0.001 | N | 0.287 | 0.079 | 0.16115917748 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
V/I | rs1385503559 | -0.038 | 0.001 | N | 0.287 | 0.079 | 0.16115917748 | gnomAD-4.0.0 | 6.84448E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99724E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8759 | likely_pathogenic | 0.866 | pathogenic | -2.101 | Highly Destabilizing | 0.189 | N | 0.71 | prob.delet. | D | 0.576239929 | None | None | N |
V/C | 0.9793 | likely_pathogenic | 0.9747 | pathogenic | -1.873 | Destabilizing | 0.962 | D | 0.739 | deleterious | None | None | None | None | N |
V/D | 0.9912 | likely_pathogenic | 0.9929 | pathogenic | -2.843 | Highly Destabilizing | 0.623 | D | 0.912 | deleterious | D | 0.576239929 | None | None | N |
V/E | 0.9805 | likely_pathogenic | 0.9833 | pathogenic | -2.528 | Highly Destabilizing | 0.687 | D | 0.91 | deleterious | None | None | None | None | N |
V/F | 0.5986 | likely_pathogenic | 0.5658 | pathogenic | -1.253 | Destabilizing | 0.449 | N | 0.808 | deleterious | N | 0.434617514 | None | None | N |
V/G | 0.9027 | likely_pathogenic | 0.9117 | pathogenic | -2.739 | Highly Destabilizing | 0.623 | D | 0.911 | deleterious | D | 0.576239929 | None | None | N |
V/H | 0.9952 | likely_pathogenic | 0.9952 | pathogenic | -2.665 | Highly Destabilizing | 0.962 | D | 0.879 | deleterious | None | None | None | None | N |
V/I | 0.087 | likely_benign | 0.0815 | benign | -0.265 | Destabilizing | 0.001 | N | 0.287 | neutral | N | 0.434903698 | None | None | N |
V/K | 0.9889 | likely_pathogenic | 0.9897 | pathogenic | -1.68 | Destabilizing | 0.687 | D | 0.912 | deleterious | None | None | None | None | N |
V/L | 0.4819 | ambiguous | 0.4344 | ambiguous | -0.265 | Destabilizing | 0.001 | N | 0.39 | neutral | D | 0.574667273 | None | None | N |
V/M | 0.5993 | likely_pathogenic | 0.5556 | ambiguous | -0.583 | Destabilizing | 0.519 | D | 0.702 | prob.delet. | None | None | None | None | N |
V/N | 0.9794 | likely_pathogenic | 0.9811 | pathogenic | -2.319 | Highly Destabilizing | 0.87 | D | 0.917 | deleterious | None | None | None | None | N |
V/P | 0.9914 | likely_pathogenic | 0.9917 | pathogenic | -0.854 | Destabilizing | 0.87 | D | 0.895 | deleterious | None | None | None | None | N |
V/Q | 0.9893 | likely_pathogenic | 0.9896 | pathogenic | -1.963 | Destabilizing | 0.87 | D | 0.903 | deleterious | None | None | None | None | N |
V/R | 0.9813 | likely_pathogenic | 0.983 | pathogenic | -1.83 | Destabilizing | 0.687 | D | 0.918 | deleterious | None | None | None | None | N |
V/S | 0.9703 | likely_pathogenic | 0.9699 | pathogenic | -2.954 | Highly Destabilizing | 0.687 | D | 0.893 | deleterious | None | None | None | None | N |
V/T | 0.9319 | likely_pathogenic | 0.9286 | pathogenic | -2.455 | Highly Destabilizing | 0.236 | N | 0.698 | prob.delet. | None | None | None | None | N |
V/W | 0.9923 | likely_pathogenic | 0.9908 | pathogenic | -1.788 | Destabilizing | 0.962 | D | 0.841 | deleterious | None | None | None | None | N |
V/Y | 0.9227 | likely_pathogenic | 0.9181 | pathogenic | -1.398 | Destabilizing | 0.687 | D | 0.765 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.