Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14394 | 43405;43406;43407 | chr2:178632951;178632950;178632949 | chr2:179497678;179497677;179497676 |
N2AB | 12753 | 38482;38483;38484 | chr2:178632951;178632950;178632949 | chr2:179497678;179497677;179497676 |
N2A | 11826 | 35701;35702;35703 | chr2:178632951;178632950;178632949 | chr2:179497678;179497677;179497676 |
N2B | 5329 | 16210;16211;16212 | chr2:178632951;178632950;178632949 | chr2:179497678;179497677;179497676 |
Novex-1 | 5454 | 16585;16586;16587 | chr2:178632951;178632950;178632949 | chr2:179497678;179497677;179497676 |
Novex-2 | 5521 | 16786;16787;16788 | chr2:178632951;178632950;178632949 | chr2:179497678;179497677;179497676 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/T | rs1264004420 | 0.066 | 0.997 | N | 0.709 | 0.452 | 0.323886383625 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 9.97E-05 | 0 | None | 0 | None | 0 | 0 | 0 |
N/T | rs1264004420 | 0.066 | 0.997 | N | 0.709 | 0.452 | 0.323886383625 | gnomAD-4.0.0 | 1.59282E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.77145E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.6546 | likely_pathogenic | 0.5912 | pathogenic | -0.2 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | N |
N/C | 0.8237 | likely_pathogenic | 0.787 | pathogenic | 0.29 | Stabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
N/D | 0.3944 | ambiguous | 0.3186 | benign | 0.147 | Stabilizing | 0.997 | D | 0.661 | prob.neutral | N | 0.453434031 | None | None | N |
N/E | 0.8319 | likely_pathogenic | 0.7864 | pathogenic | 0.098 | Stabilizing | 0.998 | D | 0.717 | prob.delet. | None | None | None | None | N |
N/F | 0.8791 | likely_pathogenic | 0.8501 | pathogenic | -0.676 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
N/G | 0.535 | ambiguous | 0.4492 | ambiguous | -0.338 | Destabilizing | 0.998 | D | 0.585 | neutral | None | None | None | None | N |
N/H | 0.3544 | ambiguous | 0.3165 | benign | -0.355 | Destabilizing | 0.999 | D | 0.705 | prob.delet. | D | 0.608257229 | None | None | N |
N/I | 0.7992 | likely_pathogenic | 0.7466 | pathogenic | 0.071 | Stabilizing | 0.999 | D | 0.723 | deleterious | D | 0.570150206 | None | None | N |
N/K | 0.8065 | likely_pathogenic | 0.7389 | pathogenic | 0.13 | Stabilizing | 0.999 | D | 0.725 | deleterious | N | 0.457552953 | None | None | N |
N/L | 0.7089 | likely_pathogenic | 0.6549 | pathogenic | 0.071 | Stabilizing | 0.999 | D | 0.636 | neutral | None | None | None | None | N |
N/M | 0.7995 | likely_pathogenic | 0.7613 | pathogenic | 0.244 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
N/P | 0.9183 | likely_pathogenic | 0.9043 | pathogenic | 0.006 | Stabilizing | 0.999 | D | 0.697 | prob.delet. | None | None | None | None | N |
N/Q | 0.8 | likely_pathogenic | 0.7545 | pathogenic | -0.267 | Destabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | N |
N/R | 0.8 | likely_pathogenic | 0.7491 | pathogenic | 0.187 | Stabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | N |
N/S | 0.161 | likely_benign | 0.1479 | benign | -0.04 | Destabilizing | 0.997 | D | 0.596 | neutral | N | 0.446083833 | None | None | N |
N/T | 0.4309 | ambiguous | 0.3573 | ambiguous | 0.042 | Stabilizing | 0.997 | D | 0.709 | prob.delet. | N | 0.462192476 | None | None | N |
N/V | 0.7411 | likely_pathogenic | 0.6962 | pathogenic | 0.006 | Stabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
N/W | 0.9752 | likely_pathogenic | 0.9684 | pathogenic | -0.737 | Destabilizing | 1.0 | D | 0.701 | prob.delet. | None | None | None | None | N |
N/Y | 0.5119 | ambiguous | 0.4507 | ambiguous | -0.438 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | D | 0.608993188 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.