Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14404 | 43435;43436;43437 | chr2:178632921;178632920;178632919 | chr2:179497648;179497647;179497646 |
N2AB | 12763 | 38512;38513;38514 | chr2:178632921;178632920;178632919 | chr2:179497648;179497647;179497646 |
N2A | 11836 | 35731;35732;35733 | chr2:178632921;178632920;178632919 | chr2:179497648;179497647;179497646 |
N2B | 5339 | 16240;16241;16242 | chr2:178632921;178632920;178632919 | chr2:179497648;179497647;179497646 |
Novex-1 | 5464 | 16615;16616;16617 | chr2:178632921;178632920;178632919 | chr2:179497648;179497647;179497646 |
Novex-2 | 5531 | 16816;16817;16818 | chr2:178632921;178632920;178632919 | chr2:179497648;179497647;179497646 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.999 | N | 0.821 | 0.232 | 0.219573609325 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
K/T | rs1296402152 | -0.955 | 0.999 | N | 0.749 | 0.427 | 0.265010934533 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/T | rs1296402152 | -0.955 | 0.999 | N | 0.749 | 0.427 | 0.265010934533 | gnomAD-4.0.0 | 1.5937E-06 | None | None | None | None | N | None | 0 | 2.29064E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7672 | likely_pathogenic | 0.7448 | pathogenic | -0.584 | Destabilizing | 0.998 | D | 0.752 | deleterious | None | None | None | None | N |
K/C | 0.9257 | likely_pathogenic | 0.9112 | pathogenic | -0.683 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
K/D | 0.91 | likely_pathogenic | 0.8971 | pathogenic | -0.183 | Destabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | N |
K/E | 0.4022 | ambiguous | 0.379 | ambiguous | -0.037 | Destabilizing | 0.997 | D | 0.735 | deleterious | N | 0.434762658 | None | None | N |
K/F | 0.9621 | likely_pathogenic | 0.9498 | pathogenic | -0.18 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
K/G | 0.8456 | likely_pathogenic | 0.8377 | pathogenic | -0.948 | Destabilizing | 0.999 | D | 0.649 | prob.neutral | None | None | None | None | N |
K/H | 0.6422 | likely_pathogenic | 0.5888 | pathogenic | -0.969 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
K/I | 0.7171 | likely_pathogenic | 0.6699 | pathogenic | 0.366 | Stabilizing | 0.999 | D | 0.805 | deleterious | N | 0.463365763 | None | None | N |
K/L | 0.7238 | likely_pathogenic | 0.6819 | pathogenic | 0.366 | Stabilizing | 0.999 | D | 0.649 | prob.neutral | None | None | None | None | N |
K/M | 0.5262 | ambiguous | 0.492 | ambiguous | -0.045 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
K/N | 0.7917 | likely_pathogenic | 0.7538 | pathogenic | -0.65 | Destabilizing | 0.999 | D | 0.793 | deleterious | D | 0.557990936 | None | None | N |
K/P | 0.9781 | likely_pathogenic | 0.9761 | pathogenic | 0.077 | Stabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | N |
K/Q | 0.2994 | likely_benign | 0.2778 | benign | -0.582 | Destabilizing | 0.999 | D | 0.821 | deleterious | N | 0.424369624 | None | None | N |
K/R | 0.122 | likely_benign | 0.1172 | benign | -0.463 | Destabilizing | 0.997 | D | 0.664 | prob.neutral | N | 0.432205437 | None | None | N |
K/S | 0.7886 | likely_pathogenic | 0.7642 | pathogenic | -1.229 | Destabilizing | 0.998 | D | 0.767 | deleterious | None | None | None | None | N |
K/T | 0.4349 | ambiguous | 0.4172 | ambiguous | -0.873 | Destabilizing | 0.999 | D | 0.749 | deleterious | N | 0.423706473 | None | None | N |
K/V | 0.687 | likely_pathogenic | 0.6516 | pathogenic | 0.077 | Stabilizing | 0.999 | D | 0.714 | prob.delet. | None | None | None | None | N |
K/W | 0.942 | likely_pathogenic | 0.9244 | pathogenic | -0.136 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
K/Y | 0.9191 | likely_pathogenic | 0.8988 | pathogenic | 0.144 | Stabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.