Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14408 | 43447;43448;43449 | chr2:178632784;178632783;178632782 | chr2:179497511;179497510;179497509 |
N2AB | 12767 | 38524;38525;38526 | chr2:178632784;178632783;178632782 | chr2:179497511;179497510;179497509 |
N2A | 11840 | 35743;35744;35745 | chr2:178632784;178632783;178632782 | chr2:179497511;179497510;179497509 |
N2B | 5343 | 16252;16253;16254 | chr2:178632784;178632783;178632782 | chr2:179497511;179497510;179497509 |
Novex-1 | 5468 | 16627;16628;16629 | chr2:178632784;178632783;178632782 | chr2:179497511;179497510;179497509 |
Novex-2 | 5535 | 16828;16829;16830 | chr2:178632784;178632783;178632782 | chr2:179497511;179497510;179497509 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | rs767777694 | -0.59 | 0.122 | D | 0.229 | 0.386 | 0.397691132334 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7654 | likely_pathogenic | 0.7674 | pathogenic | -1.941 | Destabilizing | 0.97 | D | 0.495 | neutral | None | None | None | None | N |
L/C | 0.8607 | likely_pathogenic | 0.8561 | pathogenic | -1.104 | Destabilizing | 1.0 | D | 0.527 | neutral | None | None | None | None | N |
L/D | 0.9868 | likely_pathogenic | 0.9866 | pathogenic | -1.457 | Destabilizing | 0.999 | D | 0.589 | neutral | None | None | None | None | N |
L/E | 0.9332 | likely_pathogenic | 0.9377 | pathogenic | -1.33 | Destabilizing | 0.999 | D | 0.582 | neutral | None | None | None | None | N |
L/F | 0.5951 | likely_pathogenic | 0.5945 | pathogenic | -1.106 | Destabilizing | 0.994 | D | 0.529 | neutral | D | 0.589504257 | None | None | N |
L/G | 0.9581 | likely_pathogenic | 0.9545 | pathogenic | -2.394 | Highly Destabilizing | 0.999 | D | 0.581 | neutral | None | None | None | None | N |
L/H | 0.8924 | likely_pathogenic | 0.8965 | pathogenic | -1.697 | Destabilizing | 1.0 | D | 0.595 | neutral | D | 0.589631778 | None | None | N |
L/I | 0.1573 | likely_benign | 0.1485 | benign | -0.7 | Destabilizing | 0.122 | N | 0.229 | neutral | D | 0.532382164 | None | None | N |
L/K | 0.9211 | likely_pathogenic | 0.9207 | pathogenic | -1.333 | Destabilizing | 0.999 | D | 0.537 | neutral | None | None | None | None | N |
L/M | 0.2887 | likely_benign | 0.2773 | benign | -0.563 | Destabilizing | 0.996 | D | 0.547 | neutral | None | None | None | None | N |
L/N | 0.9161 | likely_pathogenic | 0.9198 | pathogenic | -1.351 | Destabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | N |
L/P | 0.8116 | likely_pathogenic | 0.7681 | pathogenic | -1.087 | Destabilizing | 0.998 | D | 0.592 | neutral | D | 0.54491417 | None | None | N |
L/Q | 0.8369 | likely_pathogenic | 0.8368 | pathogenic | -1.345 | Destabilizing | 0.999 | D | 0.557 | neutral | None | None | None | None | N |
L/R | 0.8651 | likely_pathogenic | 0.8641 | pathogenic | -0.952 | Destabilizing | 0.998 | D | 0.544 | neutral | D | 0.589504257 | None | None | N |
L/S | 0.878 | likely_pathogenic | 0.8808 | pathogenic | -2.073 | Highly Destabilizing | 0.996 | D | 0.509 | neutral | None | None | None | None | N |
L/T | 0.7435 | likely_pathogenic | 0.741 | pathogenic | -1.813 | Destabilizing | 0.97 | D | 0.467 | neutral | None | None | None | None | N |
L/V | 0.1664 | likely_benign | 0.1603 | benign | -1.087 | Destabilizing | 0.248 | N | 0.258 | neutral | D | 0.548248356 | None | None | N |
L/W | 0.876 | likely_pathogenic | 0.874 | pathogenic | -1.349 | Destabilizing | 1.0 | D | 0.582 | neutral | None | None | None | None | N |
L/Y | 0.9126 | likely_pathogenic | 0.9176 | pathogenic | -1.063 | Destabilizing | 0.999 | D | 0.514 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.