Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14414 | 43465;43466;43467 | chr2:178632766;178632765;178632764 | chr2:179497493;179497492;179497491 |
N2AB | 12773 | 38542;38543;38544 | chr2:178632766;178632765;178632764 | chr2:179497493;179497492;179497491 |
N2A | 11846 | 35761;35762;35763 | chr2:178632766;178632765;178632764 | chr2:179497493;179497492;179497491 |
N2B | 5349 | 16270;16271;16272 | chr2:178632766;178632765;178632764 | chr2:179497493;179497492;179497491 |
Novex-1 | 5474 | 16645;16646;16647 | chr2:178632766;178632765;178632764 | chr2:179497493;179497492;179497491 |
Novex-2 | 5541 | 16846;16847;16848 | chr2:178632766;178632765;178632764 | chr2:179497493;179497492;179497491 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.999 | D | 0.509 | 0.413 | 0.744054721055 | gnomAD-4.0.0 | 6.8455E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15972E-05 | 0 |
L/V | rs2059958801 | None | 0.999 | D | 0.488 | 0.474 | 0.782390726779 | gnomAD-4.0.0 | 3.42275E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69899E-06 | 0 | 3.31466E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8981 | likely_pathogenic | 0.8976 | pathogenic | -2.203 | Highly Destabilizing | 0.999 | D | 0.712 | prob.delet. | None | None | None | None | N |
L/C | 0.9436 | likely_pathogenic | 0.9389 | pathogenic | -1.599 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
L/D | 0.9983 | likely_pathogenic | 0.9982 | pathogenic | -2.008 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/E | 0.9899 | likely_pathogenic | 0.9892 | pathogenic | -1.781 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
L/F | 0.7463 | likely_pathogenic | 0.7621 | pathogenic | -1.274 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | D | 0.675662117 | None | None | N |
L/G | 0.9885 | likely_pathogenic | 0.9871 | pathogenic | -2.741 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
L/H | 0.9811 | likely_pathogenic | 0.9802 | pathogenic | -2.195 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | D | 0.733101046 | None | None | N |
L/I | 0.2322 | likely_benign | 0.246 | benign | -0.659 | Destabilizing | 0.999 | D | 0.509 | neutral | D | 0.541331889 | None | None | N |
L/K | 0.987 | likely_pathogenic | 0.9851 | pathogenic | -1.369 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
L/M | 0.412 | ambiguous | 0.4059 | ambiguous | -0.806 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
L/N | 0.9874 | likely_pathogenic | 0.9874 | pathogenic | -1.669 | Destabilizing | 1.0 | D | 0.91 | deleterious | None | None | None | None | N |
L/P | 0.9323 | likely_pathogenic | 0.9249 | pathogenic | -1.153 | Destabilizing | 1.0 | D | 0.911 | deleterious | D | 0.547654362 | None | None | N |
L/Q | 0.9635 | likely_pathogenic | 0.9587 | pathogenic | -1.509 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
L/R | 0.9742 | likely_pathogenic | 0.9675 | pathogenic | -1.253 | Destabilizing | 1.0 | D | 0.894 | deleterious | D | 0.734031611 | None | None | N |
L/S | 0.9741 | likely_pathogenic | 0.9746 | pathogenic | -2.447 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
L/T | 0.9265 | likely_pathogenic | 0.9287 | pathogenic | -2.067 | Highly Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
L/V | 0.3079 | likely_benign | 0.3132 | benign | -1.153 | Destabilizing | 0.999 | D | 0.488 | neutral | D | 0.660530465 | None | None | N |
L/W | 0.9718 | likely_pathogenic | 0.9699 | pathogenic | -1.573 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
L/Y | 0.9843 | likely_pathogenic | 0.9844 | pathogenic | -1.26 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.