Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14416 | 43471;43472;43473 | chr2:178632760;178632759;178632758 | chr2:179497487;179497486;179497485 |
N2AB | 12775 | 38548;38549;38550 | chr2:178632760;178632759;178632758 | chr2:179497487;179497486;179497485 |
N2A | 11848 | 35767;35768;35769 | chr2:178632760;178632759;178632758 | chr2:179497487;179497486;179497485 |
N2B | 5351 | 16276;16277;16278 | chr2:178632760;178632759;178632758 | chr2:179497487;179497486;179497485 |
Novex-1 | 5476 | 16651;16652;16653 | chr2:178632760;178632759;178632758 | chr2:179497487;179497486;179497485 |
Novex-2 | 5543 | 16852;16853;16854 | chr2:178632760;178632759;178632758 | chr2:179497487;179497486;179497485 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | None | None | 1.0 | D | 0.7 | 0.723 | 0.786937795147 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6658 | likely_pathogenic | 0.7509 | pathogenic | -0.4 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | D | 0.681789458 | None | None | N |
D/C | 0.9704 | likely_pathogenic | 0.9796 | pathogenic | -0.136 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
D/E | 0.6662 | likely_pathogenic | 0.6742 | pathogenic | -0.39 | Destabilizing | 1.0 | D | 0.4 | neutral | D | 0.741801155 | None | None | N |
D/F | 0.971 | likely_pathogenic | 0.9798 | pathogenic | -0.017 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
D/G | 0.6717 | likely_pathogenic | 0.7552 | pathogenic | -0.674 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | D | 0.740746706 | None | None | N |
D/H | 0.8327 | likely_pathogenic | 0.8755 | pathogenic | 0.043 | Stabilizing | 1.0 | D | 0.636 | neutral | D | 0.680773611 | None | None | N |
D/I | 0.9382 | likely_pathogenic | 0.9586 | pathogenic | 0.297 | Stabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | N |
D/K | 0.9287 | likely_pathogenic | 0.9526 | pathogenic | 0.131 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
D/L | 0.9343 | likely_pathogenic | 0.9532 | pathogenic | 0.297 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
D/M | 0.9775 | likely_pathogenic | 0.9828 | pathogenic | 0.454 | Stabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
D/N | 0.2697 | likely_benign | 0.3153 | benign | -0.376 | Destabilizing | 1.0 | D | 0.622 | neutral | D | 0.546292911 | None | None | N |
D/P | 0.92 | likely_pathogenic | 0.9225 | pathogenic | 0.088 | Stabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
D/Q | 0.9277 | likely_pathogenic | 0.9389 | pathogenic | -0.28 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
D/R | 0.9287 | likely_pathogenic | 0.9543 | pathogenic | 0.382 | Stabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | N |
D/S | 0.4341 | ambiguous | 0.5075 | ambiguous | -0.506 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
D/T | 0.7973 | likely_pathogenic | 0.8406 | pathogenic | -0.279 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
D/V | 0.832 | likely_pathogenic | 0.8842 | pathogenic | 0.088 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | D | 0.680871233 | None | None | N |
D/W | 0.9937 | likely_pathogenic | 0.9952 | pathogenic | 0.209 | Stabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
D/Y | 0.7955 | likely_pathogenic | 0.8704 | pathogenic | 0.246 | Stabilizing | 1.0 | D | 0.661 | neutral | D | 0.642240393 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.