Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14417 | 43474;43475;43476 | chr2:178632757;178632756;178632755 | chr2:179497484;179497483;179497482 |
N2AB | 12776 | 38551;38552;38553 | chr2:178632757;178632756;178632755 | chr2:179497484;179497483;179497482 |
N2A | 11849 | 35770;35771;35772 | chr2:178632757;178632756;178632755 | chr2:179497484;179497483;179497482 |
N2B | 5352 | 16279;16280;16281 | chr2:178632757;178632756;178632755 | chr2:179497484;179497483;179497482 |
Novex-1 | 5477 | 16654;16655;16656 | chr2:178632757;178632756;178632755 | chr2:179497484;179497483;179497482 |
Novex-2 | 5544 | 16855;16856;16857 | chr2:178632757;178632756;178632755 | chr2:179497484;179497483;179497482 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs906675886 | -0.129 | 0.997 | N | 0.504 | 0.295 | None | gnomAD-2.1.1 | 8.08E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
V/I | rs906675886 | -0.129 | 0.997 | N | 0.504 | 0.295 | None | gnomAD-4.0.0 | 1.02676E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.34948E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4573 | ambiguous | 0.4108 | ambiguous | -1.441 | Destabilizing | 0.999 | D | 0.512 | neutral | D | 0.544855455 | None | None | N |
V/C | 0.8739 | likely_pathogenic | 0.8446 | pathogenic | -0.874 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
V/D | 0.7885 | likely_pathogenic | 0.7705 | pathogenic | -1.237 | Destabilizing | 1.0 | D | 0.807 | deleterious | D | 0.671955884 | None | None | N |
V/E | 0.572 | likely_pathogenic | 0.5676 | pathogenic | -1.128 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
V/F | 0.3773 | ambiguous | 0.3738 | ambiguous | -0.887 | Destabilizing | 1.0 | D | 0.779 | deleterious | D | 0.607942725 | None | None | N |
V/G | 0.595 | likely_pathogenic | 0.5678 | pathogenic | -1.868 | Destabilizing | 1.0 | D | 0.783 | deleterious | D | 0.671239507 | None | None | N |
V/H | 0.8465 | likely_pathogenic | 0.8307 | pathogenic | -1.476 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
V/I | 0.0738 | likely_benign | 0.0738 | benign | -0.322 | Destabilizing | 0.997 | D | 0.504 | neutral | N | 0.51897943 | None | None | N |
V/K | 0.5384 | ambiguous | 0.5376 | ambiguous | -1.094 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
V/L | 0.3705 | ambiguous | 0.35 | ambiguous | -0.322 | Destabilizing | 0.997 | D | 0.522 | neutral | N | 0.516140575 | None | None | N |
V/M | 0.2191 | likely_benign | 0.2081 | benign | -0.261 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
V/N | 0.6195 | likely_pathogenic | 0.5843 | pathogenic | -1.117 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
V/P | 0.9727 | likely_pathogenic | 0.9759 | pathogenic | -0.661 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
V/Q | 0.55 | ambiguous | 0.5372 | ambiguous | -1.102 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
V/R | 0.5069 | ambiguous | 0.4892 | ambiguous | -0.817 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
V/S | 0.5603 | ambiguous | 0.5176 | ambiguous | -1.739 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
V/T | 0.3657 | ambiguous | 0.3364 | benign | -1.499 | Destabilizing | 0.999 | D | 0.57 | neutral | None | None | None | None | N |
V/W | 0.9482 | likely_pathogenic | 0.9472 | pathogenic | -1.247 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
V/Y | 0.8082 | likely_pathogenic | 0.8044 | pathogenic | -0.847 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.