Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14434 | 43525;43526;43527 | chr2:178632706;178632705;178632704 | chr2:179497433;179497432;179497431 |
N2AB | 12793 | 38602;38603;38604 | chr2:178632706;178632705;178632704 | chr2:179497433;179497432;179497431 |
N2A | 11866 | 35821;35822;35823 | chr2:178632706;178632705;178632704 | chr2:179497433;179497432;179497431 |
N2B | 5369 | 16330;16331;16332 | chr2:178632706;178632705;178632704 | chr2:179497433;179497432;179497431 |
Novex-1 | 5494 | 16705;16706;16707 | chr2:178632706;178632705;178632704 | chr2:179497433;179497432;179497431 |
Novex-2 | 5561 | 16906;16907;16908 | chr2:178632706;178632705;178632704 | chr2:179497433;179497432;179497431 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.896 | N | 0.389 | 0.332 | 0.355658859761 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/K | None | None | 0.811 | D | 0.408 | 0.464 | 0.382592752248 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1587 | likely_benign | 0.1489 | benign | -0.462 | Destabilizing | 0.896 | D | 0.453 | neutral | D | 0.542337769 | None | None | N |
E/C | 0.8984 | likely_pathogenic | 0.8832 | pathogenic | -0.218 | Destabilizing | 0.999 | D | 0.666 | neutral | None | None | None | None | N |
E/D | 0.1972 | likely_benign | 0.2009 | benign | -0.617 | Destabilizing | 0.896 | D | 0.389 | neutral | N | 0.520879236 | None | None | N |
E/F | 0.748 | likely_pathogenic | 0.7367 | pathogenic | -0.114 | Destabilizing | 0.976 | D | 0.64 | neutral | None | None | None | None | N |
E/G | 0.2449 | likely_benign | 0.2436 | benign | -0.731 | Destabilizing | 0.946 | D | 0.565 | neutral | D | 0.549316858 | None | None | N |
E/H | 0.5932 | likely_pathogenic | 0.5763 | pathogenic | -0.015 | Destabilizing | 0.997 | D | 0.401 | neutral | None | None | None | None | N |
E/I | 0.2594 | likely_benign | 0.2378 | benign | 0.235 | Stabilizing | 0.952 | D | 0.621 | neutral | None | None | None | None | N |
E/K | 0.1561 | likely_benign | 0.1597 | benign | -0.004 | Destabilizing | 0.811 | D | 0.408 | neutral | D | 0.533298593 | None | None | N |
E/L | 0.3315 | likely_benign | 0.3087 | benign | 0.235 | Stabilizing | 0.034 | N | 0.475 | neutral | None | None | None | None | N |
E/M | 0.4009 | ambiguous | 0.3648 | ambiguous | 0.345 | Stabilizing | 0.993 | D | 0.606 | neutral | None | None | None | None | N |
E/N | 0.3405 | ambiguous | 0.3465 | ambiguous | -0.411 | Destabilizing | 0.988 | D | 0.409 | neutral | None | None | None | None | N |
E/P | 0.4019 | ambiguous | 0.3955 | ambiguous | 0.024 | Stabilizing | 0.034 | N | 0.29 | neutral | None | None | None | None | N |
E/Q | 0.1565 | likely_benign | 0.1545 | benign | -0.33 | Destabilizing | 0.437 | N | 0.193 | neutral | D | 0.541072631 | None | None | N |
E/R | 0.3092 | likely_benign | 0.3129 | benign | 0.305 | Stabilizing | 0.976 | D | 0.406 | neutral | None | None | None | None | N |
E/S | 0.2622 | likely_benign | 0.2557 | benign | -0.605 | Destabilizing | 0.919 | D | 0.375 | neutral | None | None | None | None | N |
E/T | 0.2396 | likely_benign | 0.2268 | benign | -0.387 | Destabilizing | 0.959 | D | 0.486 | neutral | None | None | None | None | N |
E/V | 0.1566 | likely_benign | 0.1456 | benign | 0.024 | Stabilizing | 0.811 | D | 0.589 | neutral | D | 0.548223345 | None | None | N |
E/W | 0.9325 | likely_pathogenic | 0.9237 | pathogenic | 0.086 | Stabilizing | 0.999 | D | 0.686 | prob.neutral | None | None | None | None | N |
E/Y | 0.66 | likely_pathogenic | 0.6359 | pathogenic | 0.134 | Stabilizing | 0.996 | D | 0.617 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.