Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14447 | 43564;43565;43566 | chr2:178632667;178632666;178632665 | chr2:179497394;179497393;179497392 |
N2AB | 12806 | 38641;38642;38643 | chr2:178632667;178632666;178632665 | chr2:179497394;179497393;179497392 |
N2A | 11879 | 35860;35861;35862 | chr2:178632667;178632666;178632665 | chr2:179497394;179497393;179497392 |
N2B | 5382 | 16369;16370;16371 | chr2:178632667;178632666;178632665 | chr2:179497394;179497393;179497392 |
Novex-1 | 5507 | 16744;16745;16746 | chr2:178632667;178632666;178632665 | chr2:179497394;179497393;179497392 |
Novex-2 | 5574 | 16945;16946;16947 | chr2:178632667;178632666;178632665 | chr2:179497394;179497393;179497392 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs762998380 | -1.072 | 0.19 | N | 0.398 | 0.119 | 0.541239005379 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.96E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7901 | likely_pathogenic | 0.7687 | pathogenic | -2.296 | Highly Destabilizing | 0.633 | D | 0.61 | neutral | None | None | None | None | N |
I/C | 0.8882 | likely_pathogenic | 0.8702 | pathogenic | -1.52 | Destabilizing | 0.996 | D | 0.689 | prob.neutral | None | None | None | None | N |
I/D | 0.9623 | likely_pathogenic | 0.9579 | pathogenic | -2.472 | Highly Destabilizing | 0.987 | D | 0.779 | deleterious | None | None | None | None | N |
I/E | 0.918 | likely_pathogenic | 0.9091 | pathogenic | -2.236 | Highly Destabilizing | 0.961 | D | 0.763 | deleterious | None | None | None | None | N |
I/F | 0.2655 | likely_benign | 0.24 | benign | -1.375 | Destabilizing | 0.901 | D | 0.581 | neutral | D | 0.569711882 | None | None | N |
I/G | 0.9337 | likely_pathogenic | 0.9268 | pathogenic | -2.842 | Highly Destabilizing | 0.961 | D | 0.736 | prob.delet. | None | None | None | None | N |
I/H | 0.8766 | likely_pathogenic | 0.8594 | pathogenic | -2.248 | Highly Destabilizing | 0.996 | D | 0.761 | deleterious | None | None | None | None | N |
I/K | 0.8043 | likely_pathogenic | 0.7884 | pathogenic | -1.687 | Destabilizing | 0.923 | D | 0.729 | prob.delet. | None | None | None | None | N |
I/L | 0.1365 | likely_benign | 0.1379 | benign | -0.721 | Destabilizing | 0.003 | N | 0.156 | neutral | N | 0.395268355 | None | None | N |
I/M | 0.1287 | likely_benign | 0.1245 | benign | -0.656 | Destabilizing | 0.075 | N | 0.385 | neutral | N | 0.517541184 | None | None | N |
I/N | 0.6887 | likely_pathogenic | 0.6786 | pathogenic | -2.035 | Highly Destabilizing | 0.949 | D | 0.779 | deleterious | D | 0.612979889 | None | None | N |
I/P | 0.9614 | likely_pathogenic | 0.9621 | pathogenic | -1.226 | Destabilizing | 0.987 | D | 0.782 | deleterious | None | None | None | None | N |
I/Q | 0.8548 | likely_pathogenic | 0.8412 | pathogenic | -1.878 | Destabilizing | 0.961 | D | 0.779 | deleterious | None | None | None | None | N |
I/R | 0.7426 | likely_pathogenic | 0.7178 | pathogenic | -1.498 | Destabilizing | 0.923 | D | 0.781 | deleterious | None | None | None | None | N |
I/S | 0.8158 | likely_pathogenic | 0.7999 | pathogenic | -2.737 | Highly Destabilizing | 0.901 | D | 0.697 | prob.neutral | D | 0.612065664 | None | None | N |
I/T | 0.7561 | likely_pathogenic | 0.7318 | pathogenic | -2.341 | Highly Destabilizing | 0.722 | D | 0.646 | neutral | D | 0.606626239 | None | None | N |
I/V | 0.1475 | likely_benign | 0.139 | benign | -1.226 | Destabilizing | 0.19 | N | 0.398 | neutral | N | 0.490622904 | None | None | N |
I/W | 0.8923 | likely_pathogenic | 0.8724 | pathogenic | -1.72 | Destabilizing | 0.996 | D | 0.771 | deleterious | None | None | None | None | N |
I/Y | 0.6999 | likely_pathogenic | 0.6783 | pathogenic | -1.394 | Destabilizing | 0.961 | D | 0.738 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.