Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14456 | 43591;43592;43593 | chr2:178632640;178632639;178632638 | chr2:179497367;179497366;179497365 |
N2AB | 12815 | 38668;38669;38670 | chr2:178632640;178632639;178632638 | chr2:179497367;179497366;179497365 |
N2A | 11888 | 35887;35888;35889 | chr2:178632640;178632639;178632638 | chr2:179497367;179497366;179497365 |
N2B | 5391 | 16396;16397;16398 | chr2:178632640;178632639;178632638 | chr2:179497367;179497366;179497365 |
Novex-1 | 5516 | 16771;16772;16773 | chr2:178632640;178632639;178632638 | chr2:179497367;179497366;179497365 |
Novex-2 | 5583 | 16972;16973;16974 | chr2:178632640;178632639;178632638 | chr2:179497367;179497366;179497365 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/R | None | None | 0.002 | N | 0.295 | 0.216 | 0.526486031964 | gnomAD-4.0.0 | 3.18364E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71912E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2959 | likely_benign | 0.3049 | benign | -1.199 | Destabilizing | 0.129 | N | 0.33 | neutral | None | None | None | None | N |
I/C | 0.6164 | likely_pathogenic | 0.5883 | pathogenic | -0.702 | Destabilizing | 0.94 | D | 0.399 | neutral | None | None | None | None | N |
I/D | 0.5607 | ambiguous | 0.5754 | pathogenic | -0.686 | Destabilizing | 0.716 | D | 0.476 | neutral | None | None | None | None | N |
I/E | 0.3305 | likely_benign | 0.3484 | ambiguous | -0.728 | Destabilizing | 0.418 | N | 0.461 | neutral | None | None | None | None | N |
I/F | 0.1224 | likely_benign | 0.1186 | benign | -0.884 | Destabilizing | 0.418 | N | 0.35 | neutral | None | None | None | None | N |
I/G | 0.5219 | ambiguous | 0.5327 | ambiguous | -1.46 | Destabilizing | 0.418 | N | 0.432 | neutral | None | None | None | None | N |
I/H | 0.2883 | likely_benign | 0.2806 | benign | -0.646 | Destabilizing | 0.951 | D | 0.414 | neutral | None | None | None | None | N |
I/K | 0.1687 | likely_benign | 0.1843 | benign | -0.817 | Destabilizing | 0.213 | N | 0.443 | neutral | N | 0.461404282 | None | None | N |
I/L | 0.0895 | likely_benign | 0.091 | benign | -0.591 | Destabilizing | None | N | 0.093 | neutral | N | 0.422033189 | None | None | N |
I/M | 0.0914 | likely_benign | 0.0905 | benign | -0.475 | Destabilizing | 0.017 | N | 0.193 | neutral | N | 0.504602948 | None | None | N |
I/N | 0.1688 | likely_benign | 0.1814 | benign | -0.574 | Destabilizing | 0.716 | D | 0.473 | neutral | None | None | None | None | N |
I/P | 0.8046 | likely_pathogenic | 0.8186 | pathogenic | -0.76 | Destabilizing | 0.836 | D | 0.467 | neutral | None | None | None | None | N |
I/Q | 0.2063 | likely_benign | 0.2131 | benign | -0.787 | Destabilizing | 0.716 | D | 0.469 | neutral | None | None | None | None | N |
I/R | 0.1196 | likely_benign | 0.1265 | benign | -0.189 | Destabilizing | 0.002 | N | 0.295 | neutral | N | 0.48055884 | None | None | N |
I/S | 0.2006 | likely_benign | 0.214 | benign | -1.1 | Destabilizing | 0.264 | N | 0.411 | neutral | None | None | None | None | N |
I/T | 0.1591 | likely_benign | 0.1697 | benign | -1.031 | Destabilizing | 0.007 | N | 0.191 | neutral | N | 0.47861476 | None | None | N |
I/V | 0.091 | likely_benign | 0.0945 | benign | -0.76 | Destabilizing | 0.001 | N | 0.117 | neutral | N | 0.469751956 | None | None | N |
I/W | 0.6044 | likely_pathogenic | 0.5636 | ambiguous | -0.921 | Destabilizing | 0.983 | D | 0.431 | neutral | None | None | None | None | N |
I/Y | 0.3993 | ambiguous | 0.372 | ambiguous | -0.704 | Destabilizing | 0.836 | D | 0.449 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.