Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14457 | 43594;43595;43596 | chr2:178632637;178632636;178632635 | chr2:179497364;179497363;179497362 |
N2AB | 12816 | 38671;38672;38673 | chr2:178632637;178632636;178632635 | chr2:179497364;179497363;179497362 |
N2A | 11889 | 35890;35891;35892 | chr2:178632637;178632636;178632635 | chr2:179497364;179497363;179497362 |
N2B | 5392 | 16399;16400;16401 | chr2:178632637;178632636;178632635 | chr2:179497364;179497363;179497362 |
Novex-1 | 5517 | 16774;16775;16776 | chr2:178632637;178632636;178632635 | chr2:179497364;179497363;179497362 |
Novex-2 | 5584 | 16975;16976;16977 | chr2:178632637;178632636;178632635 | chr2:179497364;179497363;179497362 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs756061256 | -0.178 | 0.116 | N | 0.395 | 0.105 | 0.241078983079 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
K/N | rs756061256 | -0.178 | 0.116 | N | 0.395 | 0.105 | 0.241078983079 | gnomAD-4.0.0 | 6.84311E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99599E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2529 | likely_benign | 0.2802 | benign | -0.474 | Destabilizing | 0.001 | N | 0.283 | neutral | None | None | None | None | N |
K/C | 0.6418 | likely_pathogenic | 0.6233 | pathogenic | -0.397 | Destabilizing | 0.901 | D | 0.559 | neutral | None | None | None | None | N |
K/D | 0.4751 | ambiguous | 0.5314 | ambiguous | -0.046 | Destabilizing | 0.08 | N | 0.469 | neutral | None | None | None | None | N |
K/E | 0.1189 | likely_benign | 0.1296 | benign | 0.042 | Stabilizing | 0.002 | N | 0.22 | neutral | N | 0.474924225 | None | None | N |
K/F | 0.7358 | likely_pathogenic | 0.7448 | pathogenic | -0.35 | Destabilizing | 0.749 | D | 0.591 | neutral | None | None | None | None | N |
K/G | 0.3737 | ambiguous | 0.4043 | ambiguous | -0.789 | Destabilizing | 0.08 | N | 0.518 | neutral | None | None | None | None | N |
K/H | 0.2953 | likely_benign | 0.305 | benign | -1.129 | Destabilizing | 0.596 | D | 0.477 | neutral | None | None | None | None | N |
K/I | 0.2987 | likely_benign | 0.3103 | benign | 0.322 | Stabilizing | 0.08 | N | 0.561 | neutral | None | None | None | None | N |
K/L | 0.3474 | ambiguous | 0.3666 | ambiguous | 0.322 | Stabilizing | 0.036 | N | 0.493 | neutral | None | None | None | None | N |
K/M | 0.2065 | likely_benign | 0.2102 | benign | 0.122 | Stabilizing | 0.693 | D | 0.481 | neutral | N | 0.512114899 | None | None | N |
K/N | 0.3056 | likely_benign | 0.3528 | ambiguous | -0.197 | Destabilizing | 0.116 | N | 0.395 | neutral | N | 0.484957192 | None | None | N |
K/P | 0.6174 | likely_pathogenic | 0.6695 | pathogenic | 0.086 | Stabilizing | 0.001 | N | 0.277 | neutral | None | None | None | None | N |
K/Q | 0.1198 | likely_benign | 0.1202 | benign | -0.238 | Destabilizing | 0.002 | N | 0.233 | neutral | N | 0.439894571 | None | None | N |
K/R | 0.0872 | likely_benign | 0.0863 | benign | -0.429 | Destabilizing | 0.061 | N | 0.409 | neutral | N | 0.48105065 | None | None | N |
K/S | 0.2732 | likely_benign | 0.3136 | benign | -0.768 | Destabilizing | 0.002 | N | 0.211 | neutral | None | None | None | None | N |
K/T | 0.1167 | likely_benign | 0.1297 | benign | -0.479 | Destabilizing | 0.002 | N | 0.281 | neutral | N | 0.490022264 | None | None | N |
K/V | 0.2859 | likely_benign | 0.2981 | benign | 0.086 | Stabilizing | 0.002 | N | 0.353 | neutral | None | None | None | None | N |
K/W | 0.7203 | likely_pathogenic | 0.701 | pathogenic | -0.29 | Destabilizing | 0.972 | D | 0.547 | neutral | None | None | None | None | N |
K/Y | 0.5863 | likely_pathogenic | 0.5891 | pathogenic | 0.005 | Stabilizing | 0.749 | D | 0.585 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.