Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14458 | 43597;43598;43599 | chr2:178632634;178632633;178632632 | chr2:179497361;179497360;179497359 |
N2AB | 12817 | 38674;38675;38676 | chr2:178632634;178632633;178632632 | chr2:179497361;179497360;179497359 |
N2A | 11890 | 35893;35894;35895 | chr2:178632634;178632633;178632632 | chr2:179497361;179497360;179497359 |
N2B | 5393 | 16402;16403;16404 | chr2:178632634;178632633;178632632 | chr2:179497361;179497360;179497359 |
Novex-1 | 5518 | 16777;16778;16779 | chr2:178632634;178632633;178632632 | chr2:179497361;179497360;179497359 |
Novex-2 | 5585 | 16978;16979;16980 | chr2:178632634;178632633;178632632 | chr2:179497361;179497360;179497359 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.006 | N | 0.218 | 0.264 | 0.376216005999 | gnomAD-4.0.0 | 5.47445E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19673E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1399 | likely_benign | 0.1366 | benign | -0.187 | Destabilizing | 0.698 | D | 0.411 | neutral | D | 0.60335987 | None | None | N |
D/C | 0.5818 | likely_pathogenic | 0.5211 | ambiguous | 0.058 | Stabilizing | 0.998 | D | 0.623 | neutral | None | None | None | None | N |
D/E | 0.1248 | likely_benign | 0.1185 | benign | -0.194 | Destabilizing | 0.006 | N | 0.218 | neutral | N | 0.449867233 | None | None | N |
D/F | 0.4895 | ambiguous | 0.4684 | ambiguous | -0.241 | Destabilizing | 0.993 | D | 0.581 | neutral | None | None | None | None | N |
D/G | 0.1436 | likely_benign | 0.1445 | benign | -0.37 | Destabilizing | 0.822 | D | 0.365 | neutral | D | 0.546726818 | None | None | N |
D/H | 0.2307 | likely_benign | 0.2138 | benign | -0.095 | Destabilizing | 0.992 | D | 0.391 | neutral | D | 0.602515364 | None | None | N |
D/I | 0.2692 | likely_benign | 0.2635 | benign | 0.239 | Stabilizing | 0.978 | D | 0.594 | neutral | None | None | None | None | N |
D/K | 0.2899 | likely_benign | 0.2778 | benign | 0.17 | Stabilizing | 0.754 | D | 0.341 | neutral | None | None | None | None | N |
D/L | 0.3608 | ambiguous | 0.3404 | ambiguous | 0.239 | Stabilizing | 0.956 | D | 0.6 | neutral | None | None | None | None | N |
D/M | 0.5653 | likely_pathogenic | 0.5263 | ambiguous | 0.34 | Stabilizing | 0.998 | D | 0.611 | neutral | None | None | None | None | N |
D/N | 0.0923 | likely_benign | 0.0923 | benign | 0.091 | Stabilizing | 0.822 | D | 0.36 | neutral | D | 0.540477443 | None | None | N |
D/P | 0.817 | likely_pathogenic | 0.8058 | pathogenic | 0.118 | Stabilizing | 0.978 | D | 0.391 | neutral | None | None | None | None | N |
D/Q | 0.2861 | likely_benign | 0.2607 | benign | 0.109 | Stabilizing | 0.915 | D | 0.329 | neutral | None | None | None | None | N |
D/R | 0.3156 | likely_benign | 0.2998 | benign | 0.337 | Stabilizing | 0.956 | D | 0.518 | neutral | None | None | None | None | N |
D/S | 0.1234 | likely_benign | 0.1172 | benign | -0.074 | Destabilizing | 0.754 | D | 0.309 | neutral | None | None | None | None | N |
D/T | 0.2058 | likely_benign | 0.2032 | benign | 0.056 | Stabilizing | 0.956 | D | 0.345 | neutral | None | None | None | None | N |
D/V | 0.1438 | likely_benign | 0.141 | benign | 0.118 | Stabilizing | 0.942 | D | 0.601 | neutral | D | 0.541311267 | None | None | N |
D/W | 0.7924 | likely_pathogenic | 0.7641 | pathogenic | -0.176 | Destabilizing | 0.998 | D | 0.633 | neutral | None | None | None | None | N |
D/Y | 0.1547 | likely_benign | 0.1549 | benign | -0.03 | Destabilizing | 0.99 | D | 0.58 | neutral | D | 0.642138192 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.