Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14475 | 43648;43649;43650 | chr2:178632583;178632582;178632581 | chr2:179497310;179497309;179497308 |
N2AB | 12834 | 38725;38726;38727 | chr2:178632583;178632582;178632581 | chr2:179497310;179497309;179497308 |
N2A | 11907 | 35944;35945;35946 | chr2:178632583;178632582;178632581 | chr2:179497310;179497309;179497308 |
N2B | 5410 | 16453;16454;16455 | chr2:178632583;178632582;178632581 | chr2:179497310;179497309;179497308 |
Novex-1 | 5535 | 16828;16829;16830 | chr2:178632583;178632582;178632581 | chr2:179497310;179497309;179497308 |
Novex-2 | 5602 | 17029;17030;17031 | chr2:178632583;178632582;178632581 | chr2:179497310;179497309;179497308 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | None | None | 0.002 | N | 0.473 | 0.067 | 0.0482279557977 | gnomAD-4.0.0 | 9.58168E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.2595E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7892 | likely_pathogenic | 0.715 | pathogenic | -0.719 | Destabilizing | 0.982 | D | 0.758 | deleterious | None | None | None | None | N |
A/D | 0.5243 | ambiguous | 0.454 | ambiguous | -1.311 | Destabilizing | 0.7 | D | 0.765 | deleterious | None | None | None | None | N |
A/E | 0.5912 | likely_pathogenic | 0.5266 | ambiguous | -1.252 | Destabilizing | 0.781 | D | 0.772 | deleterious | D | 0.615642753 | None | None | N |
A/F | 0.8103 | likely_pathogenic | 0.7703 | pathogenic | -0.796 | Destabilizing | 0.7 | D | 0.774 | deleterious | None | None | None | None | N |
A/G | 0.0863 | likely_benign | 0.0645 | benign | -1.208 | Destabilizing | 0.002 | N | 0.473 | neutral | N | 0.396679114 | None | None | N |
A/H | 0.8887 | likely_pathogenic | 0.8578 | pathogenic | -1.461 | Destabilizing | 0.982 | D | 0.769 | deleterious | None | None | None | None | N |
A/I | 0.8486 | likely_pathogenic | 0.8129 | pathogenic | -0.026 | Destabilizing | 0.539 | D | 0.78 | deleterious | None | None | None | None | N |
A/K | 0.8628 | likely_pathogenic | 0.8095 | pathogenic | -1.169 | Destabilizing | 0.7 | D | 0.774 | deleterious | None | None | None | None | N |
A/L | 0.6592 | likely_pathogenic | 0.5948 | pathogenic | -0.026 | Destabilizing | 0.25 | N | 0.725 | prob.delet. | None | None | None | None | N |
A/M | 0.6643 | likely_pathogenic | 0.6202 | pathogenic | 0.003 | Stabilizing | 0.947 | D | 0.763 | deleterious | None | None | None | None | N |
A/N | 0.5732 | likely_pathogenic | 0.514 | ambiguous | -1.079 | Destabilizing | 0.7 | D | 0.773 | deleterious | None | None | None | None | N |
A/P | 0.9738 | likely_pathogenic | 0.9707 | pathogenic | -0.26 | Destabilizing | 0.781 | D | 0.77 | deleterious | D | 0.618355604 | None | None | N |
A/Q | 0.7087 | likely_pathogenic | 0.629 | pathogenic | -1.092 | Destabilizing | 0.826 | D | 0.761 | deleterious | None | None | None | None | N |
A/R | 0.7689 | likely_pathogenic | 0.6981 | pathogenic | -0.97 | Destabilizing | 0.826 | D | 0.766 | deleterious | None | None | None | None | N |
A/S | 0.1191 | likely_benign | 0.1175 | benign | -1.473 | Destabilizing | 0.201 | N | 0.711 | prob.delet. | N | 0.505749689 | None | None | N |
A/T | 0.2597 | likely_benign | 0.2321 | benign | -1.303 | Destabilizing | 0.334 | N | 0.746 | deleterious | D | 0.576509501 | None | None | N |
A/V | 0.5317 | ambiguous | 0.486 | ambiguous | -0.26 | Destabilizing | 0.004 | N | 0.509 | neutral | D | 0.618230155 | None | None | N |
A/W | 0.9683 | likely_pathogenic | 0.9502 | pathogenic | -1.338 | Destabilizing | 0.982 | D | 0.739 | prob.delet. | None | None | None | None | N |
A/Y | 0.8868 | likely_pathogenic | 0.8515 | pathogenic | -0.824 | Destabilizing | 0.826 | D | 0.782 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.