Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14485 | 43678;43679;43680 | chr2:178632553;178632552;178632551 | chr2:179497280;179497279;179497278 |
N2AB | 12844 | 38755;38756;38757 | chr2:178632553;178632552;178632551 | chr2:179497280;179497279;179497278 |
N2A | 11917 | 35974;35975;35976 | chr2:178632553;178632552;178632551 | chr2:179497280;179497279;179497278 |
N2B | 5420 | 16483;16484;16485 | chr2:178632553;178632552;178632551 | chr2:179497280;179497279;179497278 |
Novex-1 | 5545 | 16858;16859;16860 | chr2:178632553;178632552;178632551 | chr2:179497280;179497279;179497278 |
Novex-2 | 5612 | 17059;17060;17061 | chr2:178632553;178632552;178632551 | chr2:179497280;179497279;179497278 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | rs769249986 | 0.707 | 0.117 | N | 0.603 | 0.14 | 0.101711395817 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.55E-05 | None | 0 | 0 | 0 |
H/Q | rs769249986 | 0.707 | 0.117 | N | 0.603 | 0.14 | 0.101711395817 | gnomAD-4.0.0 | 2.05328E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.48044E-05 | 0 |
H/R | rs2059936761 | None | None | N | 0.286 | 0.174 | 0.0806252709748 | gnomAD-4.0.0 | 1.59238E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02737E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.355 | ambiguous | 0.3238 | benign | -0.24 | Destabilizing | 0.067 | N | 0.614 | neutral | None | None | None | None | N |
H/C | 0.153 | likely_benign | 0.1409 | benign | 0.392 | Stabilizing | 0.935 | D | 0.61 | neutral | None | None | None | None | N |
H/D | 0.3777 | ambiguous | 0.3482 | ambiguous | -0.187 | Destabilizing | 0.117 | N | 0.637 | neutral | N | 0.480239083 | None | None | N |
H/E | 0.3565 | ambiguous | 0.3238 | benign | -0.121 | Destabilizing | 0.035 | N | 0.607 | neutral | None | None | None | None | N |
H/F | 0.371 | ambiguous | 0.3381 | benign | 0.754 | Stabilizing | 0.555 | D | 0.651 | neutral | None | None | None | None | N |
H/G | 0.3665 | ambiguous | 0.3471 | ambiguous | -0.575 | Destabilizing | 0.149 | N | 0.631 | neutral | None | None | None | None | N |
H/I | 0.3231 | likely_benign | 0.3013 | benign | 0.654 | Stabilizing | 0.555 | D | 0.648 | neutral | None | None | None | None | N |
H/K | 0.1789 | likely_benign | 0.1706 | benign | -0.14 | Destabilizing | 0.035 | N | 0.527 | neutral | None | None | None | None | N |
H/L | 0.1392 | likely_benign | 0.1361 | benign | 0.654 | Stabilizing | 0.117 | N | 0.65 | neutral | N | 0.464663284 | None | None | N |
H/M | 0.5052 | ambiguous | 0.4638 | ambiguous | 0.436 | Stabilizing | 0.791 | D | 0.627 | neutral | None | None | None | None | N |
H/N | 0.1578 | likely_benign | 0.1484 | benign | -0.218 | Destabilizing | 0.117 | N | 0.563 | neutral | N | 0.436709438 | None | None | N |
H/P | 0.3791 | ambiguous | 0.4007 | ambiguous | 0.38 | Stabilizing | 0.484 | N | 0.648 | neutral | N | 0.48031287 | None | None | N |
H/Q | 0.1509 | likely_benign | 0.1343 | benign | -0.046 | Destabilizing | 0.117 | N | 0.603 | neutral | N | 0.390387439 | None | None | N |
H/R | 0.0584 | likely_benign | 0.0586 | benign | -0.679 | Destabilizing | None | N | 0.286 | neutral | N | 0.319195944 | None | None | N |
H/S | 0.3049 | likely_benign | 0.2719 | benign | -0.195 | Destabilizing | 0.149 | N | 0.607 | neutral | None | None | None | None | N |
H/T | 0.3093 | likely_benign | 0.2778 | benign | -0.022 | Destabilizing | 0.149 | N | 0.642 | neutral | None | None | None | None | N |
H/V | 0.2696 | likely_benign | 0.2582 | benign | 0.38 | Stabilizing | 0.149 | N | 0.653 | neutral | None | None | None | None | N |
H/W | 0.3101 | likely_benign | 0.3055 | benign | 0.937 | Stabilizing | 0.935 | D | 0.627 | neutral | None | None | None | None | N |
H/Y | 0.1158 | likely_benign | 0.1116 | benign | 1.096 | Stabilizing | 0.211 | N | 0.604 | neutral | N | 0.480301101 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.