Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14488 | 43687;43688;43689 | chr2:178632544;178632543;178632542 | chr2:179497271;179497270;179497269 |
N2AB | 12847 | 38764;38765;38766 | chr2:178632544;178632543;178632542 | chr2:179497271;179497270;179497269 |
N2A | 11920 | 35983;35984;35985 | chr2:178632544;178632543;178632542 | chr2:179497271;179497270;179497269 |
N2B | 5423 | 16492;16493;16494 | chr2:178632544;178632543;178632542 | chr2:179497271;179497270;179497269 |
Novex-1 | 5548 | 16867;16868;16869 | chr2:178632544;178632543;178632542 | chr2:179497271;179497270;179497269 |
Novex-2 | 5615 | 17068;17069;17070 | chr2:178632544;178632543;178632542 | chr2:179497271;179497270;179497269 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | None | None | 0.955 | D | 0.563 | 0.359 | 0.375861065471 | gnomAD-4.0.0 | 6.84494E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16125E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0922 | likely_benign | 0.0896 | benign | -0.571 | Destabilizing | 0.053 | N | 0.369 | neutral | N | 0.329876385 | None | None | N |
G/C | 0.4271 | ambiguous | 0.4268 | ambiguous | -0.991 | Destabilizing | 0.999 | D | 0.807 | deleterious | N | 0.441698646 | None | None | N |
G/D | 0.9519 | likely_pathogenic | 0.9548 | pathogenic | -1.413 | Destabilizing | 0.997 | D | 0.727 | prob.delet. | D | 0.545191436 | None | None | N |
G/E | 0.9385 | likely_pathogenic | 0.9428 | pathogenic | -1.301 | Destabilizing | 0.995 | D | 0.713 | prob.delet. | None | None | None | None | N |
G/F | 0.9772 | likely_pathogenic | 0.9748 | pathogenic | -0.624 | Destabilizing | 0.998 | D | 0.81 | deleterious | None | None | None | None | N |
G/H | 0.9676 | likely_pathogenic | 0.9643 | pathogenic | -1.524 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
G/I | 0.8892 | likely_pathogenic | 0.879 | pathogenic | 0.352 | Stabilizing | 0.995 | D | 0.788 | deleterious | None | None | None | None | N |
G/K | 0.9717 | likely_pathogenic | 0.9711 | pathogenic | -0.792 | Destabilizing | 0.995 | D | 0.722 | prob.delet. | None | None | None | None | N |
G/L | 0.9004 | likely_pathogenic | 0.8894 | pathogenic | 0.352 | Stabilizing | 0.99 | D | 0.736 | prob.delet. | None | None | None | None | N |
G/M | 0.9324 | likely_pathogenic | 0.9256 | pathogenic | 0.019 | Stabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
G/N | 0.9313 | likely_pathogenic | 0.9295 | pathogenic | -0.881 | Destabilizing | 0.998 | D | 0.727 | prob.delet. | None | None | None | None | N |
G/P | 0.9947 | likely_pathogenic | 0.9933 | pathogenic | 0.089 | Stabilizing | 0.998 | D | 0.761 | deleterious | None | None | None | None | N |
G/Q | 0.9267 | likely_pathogenic | 0.9234 | pathogenic | -0.795 | Destabilizing | 0.998 | D | 0.782 | deleterious | None | None | None | None | N |
G/R | 0.8859 | likely_pathogenic | 0.8862 | pathogenic | -0.916 | Destabilizing | 0.997 | D | 0.761 | deleterious | D | 0.544442258 | None | None | N |
G/S | 0.1815 | likely_benign | 0.1824 | benign | -1.281 | Destabilizing | 0.955 | D | 0.563 | neutral | D | 0.529156576 | None | None | N |
G/T | 0.5474 | ambiguous | 0.5273 | ambiguous | -1.05 | Destabilizing | 0.995 | D | 0.705 | prob.neutral | None | None | None | None | N |
G/V | 0.6863 | likely_pathogenic | 0.6729 | pathogenic | 0.089 | Stabilizing | 0.987 | D | 0.73 | prob.delet. | D | 0.529722195 | None | None | N |
G/W | 0.9631 | likely_pathogenic | 0.9603 | pathogenic | -1.279 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
G/Y | 0.9662 | likely_pathogenic | 0.9645 | pathogenic | -0.683 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.