Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14489 | 43690;43691;43692 | chr2:178632541;178632540;178632539 | chr2:179497268;179497267;179497266 |
N2AB | 12848 | 38767;38768;38769 | chr2:178632541;178632540;178632539 | chr2:179497268;179497267;179497266 |
N2A | 11921 | 35986;35987;35988 | chr2:178632541;178632540;178632539 | chr2:179497268;179497267;179497266 |
N2B | 5424 | 16495;16496;16497 | chr2:178632541;178632540;178632539 | chr2:179497268;179497267;179497266 |
Novex-1 | 5549 | 16870;16871;16872 | chr2:178632541;178632540;178632539 | chr2:179497268;179497267;179497266 |
Novex-2 | 5616 | 17071;17072;17073 | chr2:178632541;178632540;178632539 | chr2:179497268;179497267;179497266 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.999 | D | 0.603 | 0.488 | 0.563062970572 | gnomAD-4.0.0 | 1.59278E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8601E-06 | 0 | 0 |
K/R | None | None | 0.999 | D | 0.549 | 0.551 | 0.541602255418 | gnomAD-4.0.0 | 1.59277E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43509E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8473 | likely_pathogenic | 0.8237 | pathogenic | -0.77 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/C | 0.9361 | likely_pathogenic | 0.9162 | pathogenic | -0.806 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
K/D | 0.9264 | likely_pathogenic | 0.9117 | pathogenic | -0.01 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
K/E | 0.5958 | likely_pathogenic | 0.5651 | pathogenic | 0.121 | Stabilizing | 0.999 | D | 0.603 | neutral | D | 0.545803227 | None | None | N |
K/F | 0.9377 | likely_pathogenic | 0.9296 | pathogenic | -0.421 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
K/G | 0.9157 | likely_pathogenic | 0.8994 | pathogenic | -1.148 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/H | 0.6208 | likely_pathogenic | 0.5583 | ambiguous | -1.379 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/I | 0.6655 | likely_pathogenic | 0.6376 | pathogenic | 0.219 | Stabilizing | 1.0 | D | 0.746 | deleterious | D | 0.660698043 | None | None | N |
K/L | 0.7052 | likely_pathogenic | 0.6913 | pathogenic | 0.219 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/M | 0.4892 | ambiguous | 0.4772 | ambiguous | 0.08 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/N | 0.7585 | likely_pathogenic | 0.7336 | pathogenic | -0.545 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | D | 0.527519082 | None | None | N |
K/P | 0.9806 | likely_pathogenic | 0.9733 | pathogenic | -0.081 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
K/Q | 0.3957 | ambiguous | 0.3569 | ambiguous | -0.599 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | D | 0.540266784 | None | None | N |
K/R | 0.1426 | likely_benign | 0.1253 | benign | -0.579 | Destabilizing | 0.999 | D | 0.549 | neutral | D | 0.660610816 | None | None | N |
K/S | 0.8406 | likely_pathogenic | 0.8191 | pathogenic | -1.311 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
K/T | 0.4807 | ambiguous | 0.4548 | ambiguous | -0.96 | Destabilizing | 1.0 | D | 0.749 | deleterious | D | 0.54909876 | None | None | N |
K/V | 0.6819 | likely_pathogenic | 0.6514 | pathogenic | -0.081 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
K/W | 0.9383 | likely_pathogenic | 0.9226 | pathogenic | -0.242 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
K/Y | 0.8689 | likely_pathogenic | 0.8518 | pathogenic | 0.044 | Stabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.