Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14491 | 43696;43697;43698 | chr2:178632535;178632534;178632533 | chr2:179497262;179497261;179497260 |
N2AB | 12850 | 38773;38774;38775 | chr2:178632535;178632534;178632533 | chr2:179497262;179497261;179497260 |
N2A | 11923 | 35992;35993;35994 | chr2:178632535;178632534;178632533 | chr2:179497262;179497261;179497260 |
N2B | 5426 | 16501;16502;16503 | chr2:178632535;178632534;178632533 | chr2:179497262;179497261;179497260 |
Novex-1 | 5551 | 16876;16877;16878 | chr2:178632535;178632534;178632533 | chr2:179497262;179497261;179497260 |
Novex-2 | 5618 | 17077;17078;17079 | chr2:178632535;178632534;178632533 | chr2:179497262;179497261;179497260 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs765783194 | None | 0.132 | N | 0.126 | 0.064 | 0.530309751445 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 1.96567E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs765783194 | None | 0.132 | N | 0.126 | 0.064 | 0.530309751445 | gnomAD-4.0.0 | 1.97189E-05 | None | None | None | None | N | None | 0 | 1.96567E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6972 | likely_pathogenic | 0.6391 | pathogenic | -1.677 | Destabilizing | 0.938 | D | 0.482 | neutral | None | None | None | None | N |
I/C | 0.8716 | likely_pathogenic | 0.8468 | pathogenic | -0.973 | Destabilizing | 0.999 | D | 0.543 | neutral | None | None | None | None | N |
I/D | 0.8828 | likely_pathogenic | 0.895 | pathogenic | -1.221 | Destabilizing | 0.997 | D | 0.599 | neutral | None | None | None | None | N |
I/E | 0.7919 | likely_pathogenic | 0.7861 | pathogenic | -1.188 | Destabilizing | 0.997 | D | 0.605 | neutral | None | None | None | None | N |
I/F | 0.2366 | likely_benign | 0.1879 | benign | -1.06 | Destabilizing | 0.076 | N | 0.218 | neutral | N | 0.470881175 | None | None | N |
I/G | 0.8952 | likely_pathogenic | 0.8819 | pathogenic | -2.023 | Highly Destabilizing | 0.997 | D | 0.596 | neutral | None | None | None | None | N |
I/H | 0.5983 | likely_pathogenic | 0.5599 | ambiguous | -1.157 | Destabilizing | 0.999 | D | 0.616 | neutral | None | None | None | None | N |
I/K | 0.5762 | likely_pathogenic | 0.5794 | pathogenic | -1.26 | Destabilizing | 0.997 | D | 0.603 | neutral | None | None | None | None | N |
I/L | 0.1957 | likely_benign | 0.1659 | benign | -0.785 | Destabilizing | 0.506 | D | 0.243 | neutral | D | 0.522124255 | None | None | N |
I/M | 0.1735 | likely_benign | 0.1481 | benign | -0.605 | Destabilizing | 0.988 | D | 0.483 | neutral | N | 0.496687616 | None | None | N |
I/N | 0.4383 | ambiguous | 0.4354 | ambiguous | -1.16 | Destabilizing | 0.996 | D | 0.609 | neutral | D | 0.523612939 | None | None | N |
I/P | 0.9805 | likely_pathogenic | 0.9845 | pathogenic | -1.052 | Destabilizing | 0.997 | D | 0.608 | neutral | None | None | None | None | N |
I/Q | 0.6222 | likely_pathogenic | 0.5986 | pathogenic | -1.297 | Destabilizing | 0.997 | D | 0.61 | neutral | None | None | None | None | N |
I/R | 0.468 | ambiguous | 0.4505 | ambiguous | -0.641 | Destabilizing | 0.997 | D | 0.611 | neutral | None | None | None | None | N |
I/S | 0.5487 | ambiguous | 0.5106 | ambiguous | -1.763 | Destabilizing | 0.988 | D | 0.519 | neutral | N | 0.518858746 | None | None | N |
I/T | 0.4261 | ambiguous | 0.382 | ambiguous | -1.615 | Destabilizing | 0.919 | D | 0.448 | neutral | N | 0.489964558 | None | None | N |
I/V | 0.139 | likely_benign | 0.1199 | benign | -1.052 | Destabilizing | 0.132 | N | 0.126 | neutral | N | 0.457585441 | None | None | N |
I/W | 0.8405 | likely_pathogenic | 0.8272 | pathogenic | -1.179 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
I/Y | 0.6043 | likely_pathogenic | 0.5876 | pathogenic | -0.952 | Destabilizing | 0.964 | D | 0.486 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.