Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14497 | 43714;43715;43716 | chr2:178632405;178632404;178632403 | chr2:179497132;179497131;179497130 |
N2AB | 12856 | 38791;38792;38793 | chr2:178632405;178632404;178632403 | chr2:179497132;179497131;179497130 |
N2A | 11929 | 36010;36011;36012 | chr2:178632405;178632404;178632403 | chr2:179497132;179497131;179497130 |
N2B | 5432 | 16519;16520;16521 | chr2:178632405;178632404;178632403 | chr2:179497132;179497131;179497130 |
Novex-1 | 5557 | 16894;16895;16896 | chr2:178632405;178632404;178632403 | chr2:179497132;179497131;179497130 |
Novex-2 | 5624 | 17095;17096;17097 | chr2:178632405;178632404;178632403 | chr2:179497132;179497131;179497130 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | D | 0.773 | 0.611 | 0.872922419221 | gnomAD-4.0.0 | 1.67021E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.82294E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8815 | likely_pathogenic | 0.904 | pathogenic | -1.981 | Destabilizing | 0.999 | D | 0.608 | neutral | None | None | None | None | N |
L/C | 0.9235 | likely_pathogenic | 0.9185 | pathogenic | -1.019 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
L/D | 0.9912 | likely_pathogenic | 0.9938 | pathogenic | -1.706 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
L/E | 0.9416 | likely_pathogenic | 0.958 | pathogenic | -1.637 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
L/F | 0.6925 | likely_pathogenic | 0.713 | pathogenic | -1.339 | Destabilizing | 1.0 | D | 0.663 | neutral | D | 0.664072499 | None | None | N |
L/G | 0.9645 | likely_pathogenic | 0.9726 | pathogenic | -2.341 | Highly Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
L/H | 0.9298 | likely_pathogenic | 0.9451 | pathogenic | -1.493 | Destabilizing | 1.0 | D | 0.755 | deleterious | D | 0.664160344 | None | None | N |
L/I | 0.2552 | likely_benign | 0.2429 | benign | -1.014 | Destabilizing | 0.999 | D | 0.513 | neutral | D | 0.542630577 | None | None | N |
L/K | 0.9106 | likely_pathogenic | 0.9311 | pathogenic | -1.389 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
L/M | 0.3889 | ambiguous | 0.3872 | ambiguous | -0.808 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | N |
L/N | 0.9567 | likely_pathogenic | 0.9669 | pathogenic | -1.237 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
L/P | 0.7924 | likely_pathogenic | 0.8362 | pathogenic | -1.311 | Destabilizing | 1.0 | D | 0.773 | deleterious | D | 0.621603911 | None | None | N |
L/Q | 0.872 | likely_pathogenic | 0.9026 | pathogenic | -1.34 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
L/R | 0.8795 | likely_pathogenic | 0.9082 | pathogenic | -0.878 | Destabilizing | 1.0 | D | 0.781 | deleterious | D | 0.664072499 | None | None | N |
L/S | 0.9592 | likely_pathogenic | 0.9697 | pathogenic | -1.795 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
L/T | 0.8654 | likely_pathogenic | 0.8921 | pathogenic | -1.604 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
L/V | 0.2875 | likely_benign | 0.2905 | benign | -1.311 | Destabilizing | 0.999 | D | 0.55 | neutral | D | 0.548253452 | None | None | N |
L/W | 0.862 | likely_pathogenic | 0.8762 | pathogenic | -1.442 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
L/Y | 0.9297 | likely_pathogenic | 0.9395 | pathogenic | -1.238 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.