Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14500 | 43723;43724;43725 | chr2:178632396;178632395;178632394 | chr2:179497123;179497122;179497121 |
N2AB | 12859 | 38800;38801;38802 | chr2:178632396;178632395;178632394 | chr2:179497123;179497122;179497121 |
N2A | 11932 | 36019;36020;36021 | chr2:178632396;178632395;178632394 | chr2:179497123;179497122;179497121 |
N2B | 5435 | 16528;16529;16530 | chr2:178632396;178632395;178632394 | chr2:179497123;179497122;179497121 |
Novex-1 | 5560 | 16903;16904;16905 | chr2:178632396;178632395;178632394 | chr2:179497123;179497122;179497121 |
Novex-2 | 5627 | 17104;17105;17106 | chr2:178632396;178632395;178632394 | chr2:179497123;179497122;179497121 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.934 | D | 0.33 | 0.465 | 0.670596422724 | gnomAD-4.0.0 | 1.64681E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.93415E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3622 | ambiguous | 0.3276 | benign | -0.984 | Destabilizing | 0.525 | D | 0.309 | neutral | None | None | None | None | N |
L/C | 0.6453 | likely_pathogenic | 0.5911 | pathogenic | -0.713 | Destabilizing | 0.998 | D | 0.36 | neutral | None | None | None | None | N |
L/D | 0.739 | likely_pathogenic | 0.7176 | pathogenic | -0.182 | Destabilizing | 0.991 | D | 0.432 | neutral | None | None | None | None | N |
L/E | 0.409 | ambiguous | 0.3653 | ambiguous | -0.227 | Destabilizing | 0.974 | D | 0.419 | neutral | None | None | None | None | N |
L/F | 0.2046 | likely_benign | 0.1914 | benign | -0.664 | Destabilizing | 0.934 | D | 0.33 | neutral | D | 0.534399213 | None | None | N |
L/G | 0.7101 | likely_pathogenic | 0.667 | pathogenic | -1.226 | Destabilizing | 0.974 | D | 0.398 | neutral | None | None | None | None | N |
L/H | 0.2741 | likely_benign | 0.2298 | benign | -0.319 | Destabilizing | 0.997 | D | 0.409 | neutral | D | 0.534503061 | None | None | N |
L/I | 0.0757 | likely_benign | 0.0712 | benign | -0.437 | Destabilizing | 0.002 | N | 0.081 | neutral | N | 0.368869092 | None | None | N |
L/K | 0.3481 | ambiguous | 0.2933 | benign | -0.585 | Destabilizing | 0.974 | D | 0.379 | neutral | None | None | None | None | N |
L/M | 0.1596 | likely_benign | 0.1419 | benign | -0.421 | Destabilizing | 0.949 | D | 0.416 | neutral | None | None | None | None | N |
L/N | 0.4286 | ambiguous | 0.3921 | ambiguous | -0.413 | Destabilizing | 0.991 | D | 0.415 | neutral | None | None | None | None | N |
L/P | 0.7556 | likely_pathogenic | 0.7534 | pathogenic | -0.585 | Destabilizing | 0.989 | D | 0.428 | neutral | D | 0.534519713 | None | None | N |
L/Q | 0.2041 | likely_benign | 0.1633 | benign | -0.598 | Destabilizing | 0.991 | D | 0.368 | neutral | None | None | None | None | N |
L/R | 0.254 | likely_benign | 0.2042 | benign | 0.005 | Stabilizing | 0.989 | D | 0.387 | neutral | N | 0.475048732 | None | None | N |
L/S | 0.3232 | likely_benign | 0.3037 | benign | -0.996 | Destabilizing | 0.915 | D | 0.347 | neutral | None | None | None | None | N |
L/T | 0.2737 | likely_benign | 0.228 | benign | -0.926 | Destabilizing | 0.842 | D | 0.275 | neutral | None | None | None | None | N |
L/V | 0.1039 | likely_benign | 0.0928 | benign | -0.585 | Destabilizing | 0.005 | N | 0.124 | neutral | N | 0.349863895 | None | None | N |
L/W | 0.4159 | ambiguous | 0.3872 | ambiguous | -0.677 | Destabilizing | 0.998 | D | 0.477 | neutral | None | None | None | None | N |
L/Y | 0.4985 | ambiguous | 0.4648 | ambiguous | -0.454 | Destabilizing | 0.991 | D | 0.383 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.