Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14502 | 43729;43730;43731 | chr2:178632390;178632389;178632388 | chr2:179497117;179497116;179497115 |
N2AB | 12861 | 38806;38807;38808 | chr2:178632390;178632389;178632388 | chr2:179497117;179497116;179497115 |
N2A | 11934 | 36025;36026;36027 | chr2:178632390;178632389;178632388 | chr2:179497117;179497116;179497115 |
N2B | 5437 | 16534;16535;16536 | chr2:178632390;178632389;178632388 | chr2:179497117;179497116;179497115 |
Novex-1 | 5562 | 16909;16910;16911 | chr2:178632390;178632389;178632388 | chr2:179497117;179497116;179497115 |
Novex-2 | 5629 | 17110;17111;17112 | chr2:178632390;178632389;178632388 | chr2:179497117;179497116;179497115 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | None | None | 1.0 | D | 0.767 | 0.49 | 0.693704026606 | gnomAD-4.0.0 | 6.93061E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.06001E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1707 | likely_benign | 0.1452 | benign | -0.957 | Destabilizing | 1.0 | D | 0.752 | deleterious | D | 0.558998015 | None | None | N |
P/C | 0.8298 | likely_pathogenic | 0.7634 | pathogenic | -0.704 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
P/D | 0.7131 | likely_pathogenic | 0.6699 | pathogenic | -0.415 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
P/E | 0.5267 | ambiguous | 0.4933 | ambiguous | -0.426 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
P/F | 0.8269 | likely_pathogenic | 0.7642 | pathogenic | -0.673 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
P/G | 0.6119 | likely_pathogenic | 0.515 | ambiguous | -1.239 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
P/H | 0.4087 | ambiguous | 0.3594 | ambiguous | -0.679 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | D | 0.539645421 | None | None | N |
P/I | 0.6756 | likely_pathogenic | 0.61 | pathogenic | -0.306 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
P/K | 0.5708 | likely_pathogenic | 0.5205 | ambiguous | -0.736 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
P/L | 0.289 | likely_benign | 0.251 | benign | -0.306 | Destabilizing | 1.0 | D | 0.797 | deleterious | D | 0.643352249 | None | None | N |
P/M | 0.6583 | likely_pathogenic | 0.591 | pathogenic | -0.358 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
P/N | 0.6515 | likely_pathogenic | 0.5863 | pathogenic | -0.57 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
P/Q | 0.3605 | ambiguous | 0.3231 | benign | -0.697 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
P/R | 0.3788 | ambiguous | 0.3361 | benign | -0.29 | Destabilizing | 1.0 | D | 0.767 | deleterious | D | 0.602318152 | None | None | N |
P/S | 0.265 | likely_benign | 0.2279 | benign | -1.1 | Destabilizing | 1.0 | D | 0.817 | deleterious | D | 0.560152803 | None | None | N |
P/T | 0.2767 | likely_benign | 0.239 | benign | -0.993 | Destabilizing | 1.0 | D | 0.817 | deleterious | D | 0.559868037 | None | None | N |
P/V | 0.5127 | ambiguous | 0.4466 | ambiguous | -0.486 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
P/W | 0.9212 | likely_pathogenic | 0.8795 | pathogenic | -0.836 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
P/Y | 0.7514 | likely_pathogenic | 0.6823 | pathogenic | -0.52 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.