Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14503 | 43732;43733;43734 | chr2:178632387;178632386;178632385 | chr2:179497114;179497113;179497112 |
N2AB | 12862 | 38809;38810;38811 | chr2:178632387;178632386;178632385 | chr2:179497114;179497113;179497112 |
N2A | 11935 | 36028;36029;36030 | chr2:178632387;178632386;178632385 | chr2:179497114;179497113;179497112 |
N2B | 5438 | 16537;16538;16539 | chr2:178632387;178632386;178632385 | chr2:179497114;179497113;179497112 |
Novex-1 | 5563 | 16912;16913;16914 | chr2:178632387;178632386;178632385 | chr2:179497114;179497113;179497112 |
Novex-2 | 5630 | 17113;17114;17115 | chr2:178632387;178632386;178632385 | chr2:179497114;179497113;179497112 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.997 | D | 0.842 | 0.665 | 0.890315468549 | gnomAD-4.0.0 | 3.45772E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.52594E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9061 | likely_pathogenic | 0.889 | pathogenic | -2.17 | Highly Destabilizing | 0.953 | D | 0.593 | neutral | None | None | None | None | N |
L/C | 0.9477 | likely_pathogenic | 0.9458 | pathogenic | -1.452 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
L/D | 0.9991 | likely_pathogenic | 0.9989 | pathogenic | -2.045 | Highly Destabilizing | 0.998 | D | 0.841 | deleterious | None | None | None | None | N |
L/E | 0.9911 | likely_pathogenic | 0.9898 | pathogenic | -1.819 | Destabilizing | 0.998 | D | 0.837 | deleterious | None | None | None | None | N |
L/F | 0.802 | likely_pathogenic | 0.7913 | pathogenic | -1.158 | Destabilizing | 0.982 | D | 0.651 | neutral | D | 0.682334681 | None | None | N |
L/G | 0.989 | likely_pathogenic | 0.9881 | pathogenic | -2.718 | Highly Destabilizing | 0.998 | D | 0.837 | deleterious | None | None | None | None | N |
L/H | 0.9886 | likely_pathogenic | 0.9874 | pathogenic | -2.105 | Highly Destabilizing | 0.999 | D | 0.811 | deleterious | D | 0.680931111 | None | None | N |
L/I | 0.2698 | likely_benign | 0.23 | benign | -0.605 | Destabilizing | 0.02 | N | 0.213 | neutral | N | 0.51002097 | None | None | N |
L/K | 0.9879 | likely_pathogenic | 0.9858 | pathogenic | -1.593 | Destabilizing | 0.993 | D | 0.807 | deleterious | None | None | None | None | N |
L/M | 0.4013 | ambiguous | 0.3886 | ambiguous | -0.6 | Destabilizing | 0.986 | D | 0.688 | prob.neutral | None | None | None | None | N |
L/N | 0.9933 | likely_pathogenic | 0.993 | pathogenic | -1.899 | Destabilizing | 0.998 | D | 0.84 | deleterious | None | None | None | None | N |
L/P | 0.8898 | likely_pathogenic | 0.8407 | pathogenic | -1.105 | Destabilizing | 0.997 | D | 0.842 | deleterious | D | 0.65130003 | None | None | N |
L/Q | 0.9669 | likely_pathogenic | 0.9632 | pathogenic | -1.733 | Destabilizing | 0.998 | D | 0.802 | deleterious | None | None | None | None | N |
L/R | 0.9782 | likely_pathogenic | 0.9758 | pathogenic | -1.402 | Destabilizing | 0.997 | D | 0.801 | deleterious | D | 0.681827887 | None | None | N |
L/S | 0.9817 | likely_pathogenic | 0.9827 | pathogenic | -2.65 | Highly Destabilizing | 0.993 | D | 0.771 | deleterious | None | None | None | None | N |
L/T | 0.9373 | likely_pathogenic | 0.9362 | pathogenic | -2.27 | Highly Destabilizing | 0.986 | D | 0.746 | deleterious | None | None | None | None | N |
L/V | 0.3478 | ambiguous | 0.2996 | benign | -1.105 | Destabilizing | 0.76 | D | 0.352 | neutral | D | 0.683043451 | None | None | N |
L/W | 0.9755 | likely_pathogenic | 0.9767 | pathogenic | -1.496 | Destabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | N |
L/Y | 0.9906 | likely_pathogenic | 0.99 | pathogenic | -1.173 | Destabilizing | 0.998 | D | 0.792 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.