Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14504 | 43735;43736;43737 | chr2:178632384;178632383;178632382 | chr2:179497111;179497110;179497109 |
N2AB | 12863 | 38812;38813;38814 | chr2:178632384;178632383;178632382 | chr2:179497111;179497110;179497109 |
N2A | 11936 | 36031;36032;36033 | chr2:178632384;178632383;178632382 | chr2:179497111;179497110;179497109 |
N2B | 5439 | 16540;16541;16542 | chr2:178632384;178632383;178632382 | chr2:179497111;179497110;179497109 |
Novex-1 | 5564 | 16915;16916;16917 | chr2:178632384;178632383;178632382 | chr2:179497111;179497110;179497109 |
Novex-2 | 5631 | 17116;17117;17118 | chr2:178632384;178632383;178632382 | chr2:179497111;179497110;179497109 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.001 | N | 0.247 | 0.145 | 0.255270683199 | gnomAD-4.0.0 | 6.91768E-07 | None | None | None | None | N | None | 3.02499E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | None | None | 0.22 | D | 0.545 | 0.182 | 0.238096912614 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3017 | likely_benign | 0.2627 | benign | -0.12 | Destabilizing | 0.157 | N | 0.532 | neutral | None | None | None | None | N |
K/C | 0.7713 | likely_pathogenic | 0.7527 | pathogenic | -0.323 | Destabilizing | 0.909 | D | 0.663 | neutral | None | None | None | None | N |
K/D | 0.5247 | ambiguous | 0.4604 | ambiguous | -0.05 | Destabilizing | 0.157 | N | 0.565 | neutral | None | None | None | None | N |
K/E | 0.1148 | likely_benign | 0.0985 | benign | 0.012 | Stabilizing | 0.001 | N | 0.247 | neutral | N | 0.509397105 | None | None | N |
K/F | 0.813 | likely_pathogenic | 0.7751 | pathogenic | -0.047 | Destabilizing | 0.726 | D | 0.651 | neutral | None | None | None | None | N |
K/G | 0.4402 | ambiguous | 0.3909 | ambiguous | -0.394 | Destabilizing | 0.272 | N | 0.513 | neutral | None | None | None | None | N |
K/H | 0.3621 | ambiguous | 0.3038 | benign | -0.641 | Destabilizing | 0.909 | D | 0.607 | neutral | None | None | None | None | N |
K/I | 0.3836 | ambiguous | 0.356 | ambiguous | 0.551 | Stabilizing | 0.331 | N | 0.658 | neutral | D | 0.588564077 | None | None | N |
K/L | 0.39 | ambiguous | 0.3494 | ambiguous | 0.551 | Stabilizing | 0.157 | N | 0.513 | neutral | None | None | None | None | N |
K/M | 0.2508 | likely_benign | 0.2419 | benign | 0.11 | Stabilizing | 0.909 | D | 0.61 | neutral | None | None | None | None | N |
K/N | 0.3533 | ambiguous | 0.2949 | benign | -0.068 | Destabilizing | 0.497 | N | 0.557 | neutral | D | 0.562328336 | None | None | N |
K/P | 0.7532 | likely_pathogenic | 0.7039 | pathogenic | 0.357 | Stabilizing | 0.726 | D | 0.619 | neutral | None | None | None | None | N |
K/Q | 0.1331 | likely_benign | 0.1144 | benign | -0.122 | Destabilizing | 0.331 | N | 0.583 | neutral | N | 0.497327958 | None | None | N |
K/R | 0.0954 | likely_benign | 0.0916 | benign | -0.271 | Destabilizing | 0.22 | N | 0.545 | neutral | D | 0.557523696 | None | None | N |
K/S | 0.3582 | ambiguous | 0.296 | benign | -0.517 | Destabilizing | 0.157 | N | 0.534 | neutral | None | None | None | None | N |
K/T | 0.1248 | likely_benign | 0.1145 | benign | -0.283 | Destabilizing | 0.001 | N | 0.313 | neutral | D | 0.561429223 | None | None | N |
K/V | 0.3403 | ambiguous | 0.3081 | benign | 0.357 | Stabilizing | 0.396 | N | 0.523 | neutral | None | None | None | None | N |
K/W | 0.8259 | likely_pathogenic | 0.8028 | pathogenic | -0.067 | Destabilizing | 0.968 | D | 0.678 | prob.neutral | None | None | None | None | N |
K/Y | 0.6913 | likely_pathogenic | 0.6446 | pathogenic | 0.249 | Stabilizing | 0.726 | D | 0.643 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.