Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14510 | 43753;43754;43755 | chr2:178632366;178632365;178632364 | chr2:179497093;179497092;179497091 |
N2AB | 12869 | 38830;38831;38832 | chr2:178632366;178632365;178632364 | chr2:179497093;179497092;179497091 |
N2A | 11942 | 36049;36050;36051 | chr2:178632366;178632365;178632364 | chr2:179497093;179497092;179497091 |
N2B | 5445 | 16558;16559;16560 | chr2:178632366;178632365;178632364 | chr2:179497093;179497092;179497091 |
Novex-1 | 5570 | 16933;16934;16935 | chr2:178632366;178632365;178632364 | chr2:179497093;179497092;179497091 |
Novex-2 | 5637 | 17134;17135;17136 | chr2:178632366;178632365;178632364 | chr2:179497093;179497092;179497091 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.999 | D | 0.445 | 0.5 | 0.415564226483 | gnomAD-4.0.0 | 1.61706E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89949E-06 | 0 | 0 |
E/Q | rs769619291 | -0.996 | 1.0 | D | 0.625 | 0.516 | 0.593630346942 | gnomAD-2.1.1 | 4.3E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.56E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5405 | ambiguous | 0.6167 | pathogenic | -0.878 | Destabilizing | 0.999 | D | 0.613 | neutral | D | 0.627429502 | None | None | N |
E/C | 0.9881 | likely_pathogenic | 0.9918 | pathogenic | -0.5 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/D | 0.8142 | likely_pathogenic | 0.8436 | pathogenic | -1.1 | Destabilizing | 0.999 | D | 0.445 | neutral | D | 0.69218391 | None | None | N |
E/F | 0.986 | likely_pathogenic | 0.9906 | pathogenic | -0.385 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
E/G | 0.5081 | ambiguous | 0.5763 | pathogenic | -1.228 | Destabilizing | 1.0 | D | 0.673 | neutral | D | 0.693572591 | None | None | N |
E/H | 0.9665 | likely_pathogenic | 0.9767 | pathogenic | -0.663 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
E/I | 0.8446 | likely_pathogenic | 0.8864 | pathogenic | 0.071 | Stabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
E/K | 0.6085 | likely_pathogenic | 0.7243 | pathogenic | -0.627 | Destabilizing | 0.999 | D | 0.591 | neutral | D | 0.598999775 | None | None | N |
E/L | 0.8955 | likely_pathogenic | 0.922 | pathogenic | 0.071 | Stabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
E/M | 0.8945 | likely_pathogenic | 0.9242 | pathogenic | 0.472 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/N | 0.8884 | likely_pathogenic | 0.9087 | pathogenic | -1.057 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
E/P | 0.9367 | likely_pathogenic | 0.9538 | pathogenic | -0.224 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
E/Q | 0.4748 | ambiguous | 0.522 | ambiguous | -0.945 | Destabilizing | 1.0 | D | 0.625 | neutral | D | 0.69218391 | None | None | N |
E/R | 0.7564 | likely_pathogenic | 0.8305 | pathogenic | -0.365 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/S | 0.7974 | likely_pathogenic | 0.8427 | pathogenic | -1.357 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
E/T | 0.8085 | likely_pathogenic | 0.8567 | pathogenic | -1.07 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
E/V | 0.6591 | likely_pathogenic | 0.7519 | pathogenic | -0.224 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | D | 0.621736318 | None | None | N |
E/W | 0.9945 | likely_pathogenic | 0.9961 | pathogenic | -0.145 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
E/Y | 0.9741 | likely_pathogenic | 0.9827 | pathogenic | -0.139 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.