Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14515 | 43768;43769;43770 | chr2:178632351;178632350;178632349 | chr2:179497078;179497077;179497076 |
N2AB | 12874 | 38845;38846;38847 | chr2:178632351;178632350;178632349 | chr2:179497078;179497077;179497076 |
N2A | 11947 | 36064;36065;36066 | chr2:178632351;178632350;178632349 | chr2:179497078;179497077;179497076 |
N2B | 5450 | 16573;16574;16575 | chr2:178632351;178632350;178632349 | chr2:179497078;179497077;179497076 |
Novex-1 | 5575 | 16948;16949;16950 | chr2:178632351;178632350;178632349 | chr2:179497078;179497077;179497076 |
Novex-2 | 5642 | 17149;17150;17151 | chr2:178632351;178632350;178632349 | chr2:179497078;179497077;179497076 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.625 | D | 0.556 | 0.396 | 0.716962004524 | gnomAD-4.0.0 | 1.61086E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.46289E-05 | 0 |
V/L | None | None | 0.625 | D | 0.602 | 0.401 | 0.611273083002 | gnomAD-4.0.0 | 8.40227E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.18753E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2028 | likely_benign | 0.1747 | benign | -0.924 | Destabilizing | 0.625 | D | 0.556 | neutral | D | 0.589378312 | None | None | N |
V/C | 0.7999 | likely_pathogenic | 0.7672 | pathogenic | -0.87 | Destabilizing | 0.998 | D | 0.563 | neutral | None | None | None | None | N |
V/D | 0.3048 | likely_benign | 0.2648 | benign | -0.003 | Destabilizing | 0.728 | D | 0.523 | neutral | None | None | None | None | N |
V/E | 0.2025 | likely_benign | 0.1689 | benign | -0.01 | Destabilizing | 0.002 | N | 0.469 | neutral | N | 0.472078588 | None | None | N |
V/F | 0.2037 | likely_benign | 0.1796 | benign | -0.648 | Destabilizing | 0.991 | D | 0.569 | neutral | None | None | None | None | N |
V/G | 0.2585 | likely_benign | 0.2319 | benign | -1.202 | Destabilizing | 0.801 | D | 0.547 | neutral | D | 0.588302929 | None | None | N |
V/H | 0.5498 | ambiguous | 0.485 | ambiguous | -0.556 | Destabilizing | 0.993 | D | 0.635 | neutral | None | None | None | None | N |
V/I | 0.0856 | likely_benign | 0.0796 | benign | -0.287 | Destabilizing | 0.771 | D | 0.567 | neutral | D | 0.543558498 | None | None | N |
V/K | 0.2585 | likely_benign | 0.2225 | benign | -0.602 | Destabilizing | 0.728 | D | 0.521 | neutral | None | None | None | None | N |
V/L | 0.2042 | likely_benign | 0.1825 | benign | -0.287 | Destabilizing | 0.625 | D | 0.602 | neutral | D | 0.590157361 | None | None | N |
V/M | 0.146 | likely_benign | 0.1357 | benign | -0.437 | Destabilizing | 0.991 | D | 0.587 | neutral | None | None | None | None | N |
V/N | 0.2485 | likely_benign | 0.2145 | benign | -0.477 | Destabilizing | 0.949 | D | 0.615 | neutral | None | None | None | None | N |
V/P | 0.8285 | likely_pathogenic | 0.8078 | pathogenic | -0.463 | Destabilizing | 0.974 | D | 0.589 | neutral | None | None | None | None | N |
V/Q | 0.275 | likely_benign | 0.2431 | benign | -0.563 | Destabilizing | 0.728 | D | 0.569 | neutral | None | None | None | None | N |
V/R | 0.2518 | likely_benign | 0.2336 | benign | -0.21 | Destabilizing | 0.949 | D | 0.615 | neutral | None | None | None | None | N |
V/S | 0.197 | likely_benign | 0.1793 | benign | -1.088 | Destabilizing | 0.842 | D | 0.511 | neutral | None | None | None | None | N |
V/T | 0.1609 | likely_benign | 0.1434 | benign | -0.962 | Destabilizing | 0.842 | D | 0.555 | neutral | None | None | None | None | N |
V/W | 0.8507 | likely_pathogenic | 0.8118 | pathogenic | -0.757 | Destabilizing | 0.998 | D | 0.673 | neutral | None | None | None | None | N |
V/Y | 0.5921 | likely_pathogenic | 0.5343 | ambiguous | -0.452 | Destabilizing | 0.991 | D | 0.568 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.