Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14517 | 43774;43775;43776 | chr2:178632345;178632344;178632343 | chr2:179497072;179497071;179497070 |
N2AB | 12876 | 38851;38852;38853 | chr2:178632345;178632344;178632343 | chr2:179497072;179497071;179497070 |
N2A | 11949 | 36070;36071;36072 | chr2:178632345;178632344;178632343 | chr2:179497072;179497071;179497070 |
N2B | 5452 | 16579;16580;16581 | chr2:178632345;178632344;178632343 | chr2:179497072;179497071;179497070 |
Novex-1 | 5577 | 16954;16955;16956 | chr2:178632345;178632344;178632343 | chr2:179497072;179497071;179497070 |
Novex-2 | 5644 | 17155;17156;17157 | chr2:178632345;178632344;178632343 | chr2:179497072;179497071;179497070 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs2154220669 | None | 0.454 | N | 0.462 | 0.256 | 0.449088463789 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/A | rs2154220669 | None | 0.454 | N | 0.462 | 0.256 | 0.449088463789 | gnomAD-4.0.0 | 6.5722E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47137E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1098 | likely_benign | 0.106 | benign | -0.92 | Destabilizing | 0.454 | N | 0.462 | neutral | N | 0.505543134 | None | None | N |
T/C | 0.5128 | ambiguous | 0.5119 | ambiguous | -0.569 | Destabilizing | 0.998 | D | 0.607 | neutral | None | None | None | None | N |
T/D | 0.4464 | ambiguous | 0.4219 | ambiguous | 0.05 | Stabilizing | 0.842 | D | 0.528 | neutral | None | None | None | None | N |
T/E | 0.2929 | likely_benign | 0.2675 | benign | 0.118 | Stabilizing | 0.842 | D | 0.519 | neutral | None | None | None | None | N |
T/F | 0.2805 | likely_benign | 0.2784 | benign | -0.887 | Destabilizing | 0.949 | D | 0.643 | neutral | None | None | None | None | N |
T/G | 0.4065 | ambiguous | 0.3956 | ambiguous | -1.233 | Destabilizing | 0.842 | D | 0.547 | neutral | None | None | None | None | N |
T/H | 0.2468 | likely_benign | 0.2316 | benign | -1.429 | Destabilizing | 0.998 | D | 0.654 | neutral | None | None | None | None | N |
T/I | 0.1842 | likely_benign | 0.1748 | benign | -0.157 | Destabilizing | 0.012 | N | 0.389 | neutral | N | 0.463049243 | None | None | N |
T/K | 0.1871 | likely_benign | 0.1651 | benign | -0.418 | Destabilizing | 0.842 | D | 0.525 | neutral | None | None | None | None | N |
T/L | 0.1362 | likely_benign | 0.1292 | benign | -0.157 | Destabilizing | 0.525 | D | 0.483 | neutral | None | None | None | None | N |
T/M | 0.104 | likely_benign | 0.103 | benign | -0.07 | Destabilizing | 0.949 | D | 0.618 | neutral | None | None | None | None | N |
T/N | 0.1668 | likely_benign | 0.1554 | benign | -0.575 | Destabilizing | 0.801 | D | 0.506 | neutral | N | 0.503970995 | None | None | N |
T/P | 0.3498 | ambiguous | 0.3243 | benign | -0.378 | Destabilizing | 0.966 | D | 0.587 | neutral | N | 0.507803446 | None | None | N |
T/Q | 0.2378 | likely_benign | 0.2181 | benign | -0.589 | Destabilizing | 0.974 | D | 0.613 | neutral | None | None | None | None | N |
T/R | 0.1344 | likely_benign | 0.129 | benign | -0.39 | Destabilizing | 0.974 | D | 0.603 | neutral | None | None | None | None | N |
T/S | 0.1373 | likely_benign | 0.1273 | benign | -0.944 | Destabilizing | 0.062 | N | 0.304 | neutral | N | 0.400480372 | None | None | N |
T/V | 0.1786 | likely_benign | 0.1647 | benign | -0.378 | Destabilizing | 0.525 | D | 0.53 | neutral | None | None | None | None | N |
T/W | 0.6201 | likely_pathogenic | 0.6315 | pathogenic | -0.829 | Destabilizing | 0.998 | D | 0.673 | neutral | None | None | None | None | N |
T/Y | 0.3356 | likely_benign | 0.3371 | benign | -0.546 | Destabilizing | 0.991 | D | 0.653 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.