Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14531 | 43816;43817;43818 | chr2:178632303;178632302;178632301 | chr2:179497030;179497029;179497028 |
N2AB | 12890 | 38893;38894;38895 | chr2:178632303;178632302;178632301 | chr2:179497030;179497029;179497028 |
N2A | 11963 | 36112;36113;36114 | chr2:178632303;178632302;178632301 | chr2:179497030;179497029;179497028 |
N2B | 5466 | 16621;16622;16623 | chr2:178632303;178632302;178632301 | chr2:179497030;179497029;179497028 |
Novex-1 | 5591 | 16996;16997;16998 | chr2:178632303;178632302;178632301 | chr2:179497030;179497029;179497028 |
Novex-2 | 5658 | 17197;17198;17199 | chr2:178632303;178632302;178632301 | chr2:179497030;179497029;179497028 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1233735388 | None | 0.998 | D | 0.651 | 0.625 | 0.447410926215 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/N | rs1233735388 | None | 0.998 | D | 0.651 | 0.625 | 0.447410926215 | gnomAD-4.0.0 | 2.57678E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.80908E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8925 | likely_pathogenic | 0.8989 | pathogenic | -1.024 | Destabilizing | 0.996 | D | 0.523 | neutral | None | None | None | None | N |
K/C | 0.9153 | likely_pathogenic | 0.9266 | pathogenic | -1.121 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
K/D | 0.9821 | likely_pathogenic | 0.9837 | pathogenic | -0.495 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
K/E | 0.6789 | likely_pathogenic | 0.6963 | pathogenic | -0.329 | Destabilizing | 0.989 | D | 0.467 | neutral | D | 0.697073539 | None | None | N |
K/F | 0.9698 | likely_pathogenic | 0.9687 | pathogenic | -0.736 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
K/G | 0.9398 | likely_pathogenic | 0.9458 | pathogenic | -1.432 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/H | 0.6777 | likely_pathogenic | 0.711 | pathogenic | -1.782 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
K/I | 0.7564 | likely_pathogenic | 0.7352 | pathogenic | 0.063 | Stabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
K/L | 0.7594 | likely_pathogenic | 0.7164 | pathogenic | 0.063 | Stabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/M | 0.6605 | likely_pathogenic | 0.6459 | pathogenic | 0.004 | Stabilizing | 1.0 | D | 0.758 | deleterious | D | 0.697073539 | None | None | N |
K/N | 0.9428 | likely_pathogenic | 0.9474 | pathogenic | -0.938 | Destabilizing | 0.998 | D | 0.651 | neutral | D | 0.697073539 | None | None | N |
K/P | 0.9904 | likely_pathogenic | 0.9914 | pathogenic | -0.271 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
K/Q | 0.3542 | ambiguous | 0.3613 | ambiguous | -0.925 | Destabilizing | 0.997 | D | 0.641 | neutral | D | 0.660408011 | None | None | N |
K/R | 0.099 | likely_benign | 0.0979 | benign | -0.825 | Destabilizing | 0.217 | N | 0.259 | neutral | D | 0.533459431 | None | None | N |
K/S | 0.9266 | likely_pathogenic | 0.929 | pathogenic | -1.685 | Destabilizing | 0.996 | D | 0.526 | neutral | None | None | None | None | N |
K/T | 0.7794 | likely_pathogenic | 0.7857 | pathogenic | -1.275 | Destabilizing | 0.998 | D | 0.704 | prob.neutral | D | 0.697287266 | None | None | N |
K/V | 0.7697 | likely_pathogenic | 0.7571 | pathogenic | -0.271 | Destabilizing | 0.999 | D | 0.772 | deleterious | None | None | None | None | N |
K/W | 0.933 | likely_pathogenic | 0.9376 | pathogenic | -0.579 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
K/Y | 0.8991 | likely_pathogenic | 0.9129 | pathogenic | -0.266 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.