Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14534 | 43825;43826;43827 | chr2:178632294;178632293;178632292 | chr2:179497021;179497020;179497019 |
N2AB | 12893 | 38902;38903;38904 | chr2:178632294;178632293;178632292 | chr2:179497021;179497020;179497019 |
N2A | 11966 | 36121;36122;36123 | chr2:178632294;178632293;178632292 | chr2:179497021;179497020;179497019 |
N2B | 5469 | 16630;16631;16632 | chr2:178632294;178632293;178632292 | chr2:179497021;179497020;179497019 |
Novex-1 | 5594 | 17005;17006;17007 | chr2:178632294;178632293;178632292 | chr2:179497021;179497020;179497019 |
Novex-2 | 5661 | 17206;17207;17208 | chr2:178632294;178632293;178632292 | chr2:179497021;179497020;179497019 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | rs1431389358 | 0.109 | 0.096 | N | 0.258 | 0.204 | 0.249502417897 | gnomAD-2.1.1 | 4.13E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.13E-06 | 0 |
Q/R | rs1431389358 | 0.109 | 0.096 | N | 0.258 | 0.204 | 0.249502417897 | gnomAD-4.0.0 | 1.3722E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80188E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3469 | ambiguous | 0.2993 | benign | -0.358 | Destabilizing | 0.002 | N | 0.184 | neutral | None | None | None | None | N |
Q/C | 0.7505 | likely_pathogenic | 0.6394 | pathogenic | 0.121 | Stabilizing | 0.958 | D | 0.273 | neutral | None | None | None | None | N |
Q/D | 0.4875 | ambiguous | 0.4204 | ambiguous | 0.046 | Stabilizing | 0.22 | N | 0.217 | neutral | None | None | None | None | N |
Q/E | 0.1004 | likely_benign | 0.0899 | benign | 0.065 | Stabilizing | 0.042 | N | 0.273 | neutral | N | 0.499443068 | None | None | N |
Q/F | 0.7556 | likely_pathogenic | 0.6745 | pathogenic | -0.339 | Destabilizing | 0.667 | D | 0.315 | neutral | None | None | None | None | N |
Q/G | 0.4329 | ambiguous | 0.3756 | ambiguous | -0.614 | Destabilizing | 0.104 | N | 0.332 | neutral | None | None | None | None | N |
Q/H | 0.275 | likely_benign | 0.2233 | benign | -0.395 | Destabilizing | 0.602 | D | 0.277 | neutral | N | 0.515492695 | None | None | N |
Q/I | 0.3547 | ambiguous | 0.3039 | benign | 0.247 | Stabilizing | 0.124 | N | 0.359 | neutral | None | None | None | None | N |
Q/K | 0.0796 | likely_benign | 0.073 | benign | -0.101 | Destabilizing | None | N | 0.171 | neutral | N | 0.459462273 | None | None | N |
Q/L | 0.1907 | likely_benign | 0.1651 | benign | 0.247 | Stabilizing | 0.042 | N | 0.329 | neutral | N | 0.513494766 | None | None | N |
Q/M | 0.3869 | ambiguous | 0.3553 | ambiguous | 0.437 | Stabilizing | 0.667 | D | 0.257 | neutral | None | None | None | None | N |
Q/N | 0.3608 | ambiguous | 0.3146 | benign | -0.479 | Destabilizing | 0.22 | N | 0.259 | neutral | None | None | None | None | N |
Q/P | 0.7004 | likely_pathogenic | 0.6853 | pathogenic | 0.075 | Stabilizing | 0.301 | N | 0.357 | neutral | D | 0.539814176 | None | None | N |
Q/R | 0.1116 | likely_benign | 0.0979 | benign | 0.043 | Stabilizing | 0.096 | N | 0.258 | neutral | N | 0.513236722 | None | None | N |
Q/S | 0.3751 | ambiguous | 0.3275 | benign | -0.513 | Destabilizing | 0.055 | N | 0.275 | neutral | None | None | None | None | N |
Q/T | 0.2578 | likely_benign | 0.2206 | benign | -0.321 | Destabilizing | 0.104 | N | 0.326 | neutral | None | None | None | None | N |
Q/V | 0.269 | likely_benign | 0.2336 | benign | 0.075 | Stabilizing | 0.002 | N | 0.203 | neutral | None | None | None | None | N |
Q/W | 0.6533 | likely_pathogenic | 0.5638 | ambiguous | -0.287 | Destabilizing | 0.958 | D | 0.286 | neutral | None | None | None | None | N |
Q/Y | 0.5652 | likely_pathogenic | 0.4687 | ambiguous | -0.06 | Destabilizing | 0.859 | D | 0.317 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.