Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14537 | 43834;43835;43836 | chr2:178632285;178632284;178632283 | chr2:179497012;179497011;179497010 |
N2AB | 12896 | 38911;38912;38913 | chr2:178632285;178632284;178632283 | chr2:179497012;179497011;179497010 |
N2A | 11969 | 36130;36131;36132 | chr2:178632285;178632284;178632283 | chr2:179497012;179497011;179497010 |
N2B | 5472 | 16639;16640;16641 | chr2:178632285;178632284;178632283 | chr2:179497012;179497011;179497010 |
Novex-1 | 5597 | 17014;17015;17016 | chr2:178632285;178632284;178632283 | chr2:179497012;179497011;179497010 |
Novex-2 | 5664 | 17215;17216;17217 | chr2:178632285;178632284;178632283 | chr2:179497012;179497011;179497010 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | None | None | 1.0 | N | 0.671 | 0.323 | 0.314716216878 | gnomAD-4.0.0 | 6.85972E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00847E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.5377 | ambiguous | 0.4099 | ambiguous | 0.459 | Stabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | N |
H/C | 0.4199 | ambiguous | 0.3249 | benign | 0.726 | Stabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | N |
H/D | 0.3886 | ambiguous | 0.3019 | benign | -0.209 | Destabilizing | 1.0 | D | 0.649 | neutral | D | 0.60998294 | None | None | N |
H/E | 0.527 | ambiguous | 0.4035 | ambiguous | -0.19 | Destabilizing | 0.999 | D | 0.585 | neutral | None | None | None | None | N |
H/F | 0.4477 | ambiguous | 0.3631 | ambiguous | 1.096 | Stabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
H/G | 0.5262 | ambiguous | 0.4256 | ambiguous | 0.204 | Stabilizing | 0.999 | D | 0.592 | neutral | None | None | None | None | N |
H/I | 0.5541 | ambiguous | 0.4242 | ambiguous | 1.103 | Stabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
H/K | 0.4588 | ambiguous | 0.3487 | ambiguous | 0.356 | Stabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | N |
H/L | 0.2405 | likely_benign | 0.1872 | benign | 1.103 | Stabilizing | 1.0 | D | 0.665 | neutral | D | 0.52751297 | None | None | N |
H/M | 0.6911 | likely_pathogenic | 0.5903 | pathogenic | 0.753 | Stabilizing | 1.0 | D | 0.632 | neutral | None | None | None | None | N |
H/N | 0.1901 | likely_benign | 0.1489 | benign | 0.239 | Stabilizing | 0.999 | D | 0.583 | neutral | D | 0.603712258 | None | None | N |
H/P | 0.2221 | likely_benign | 0.1718 | benign | 0.913 | Stabilizing | 1.0 | D | 0.66 | neutral | D | 0.610535365 | None | None | N |
H/Q | 0.3815 | ambiguous | 0.2649 | benign | 0.333 | Stabilizing | 1.0 | D | 0.671 | neutral | N | 0.506269682 | None | None | N |
H/R | 0.2113 | likely_benign | 0.153 | benign | -0.237 | Destabilizing | 1.0 | D | 0.645 | neutral | D | 0.537766802 | None | None | N |
H/S | 0.3972 | ambiguous | 0.3033 | benign | 0.417 | Stabilizing | 1.0 | D | 0.646 | neutral | None | None | None | None | N |
H/T | 0.5503 | ambiguous | 0.4225 | ambiguous | 0.532 | Stabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
H/V | 0.5015 | ambiguous | 0.3789 | ambiguous | 0.913 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
H/W | 0.4997 | ambiguous | 0.4401 | ambiguous | 1.017 | Stabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
H/Y | 0.1662 | likely_benign | 0.1337 | benign | 1.276 | Stabilizing | 0.999 | D | 0.539 | neutral | D | 0.545259186 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.