Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14553 | 43882;43883;43884 | chr2:178632237;178632236;178632235 | chr2:179496964;179496963;179496962 |
N2AB | 12912 | 38959;38960;38961 | chr2:178632237;178632236;178632235 | chr2:179496964;179496963;179496962 |
N2A | 11985 | 36178;36179;36180 | chr2:178632237;178632236;178632235 | chr2:179496964;179496963;179496962 |
N2B | 5488 | 16687;16688;16689 | chr2:178632237;178632236;178632235 | chr2:179496964;179496963;179496962 |
Novex-1 | 5613 | 17062;17063;17064 | chr2:178632237;178632236;178632235 | chr2:179496964;179496963;179496962 |
Novex-2 | 5680 | 17263;17264;17265 | chr2:178632237;178632236;178632235 | chr2:179496964;179496963;179496962 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.022 | N | 0.216 | 0.297 | 0.533662478252 | gnomAD-4.0.0 | 6.86982E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.17467E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8621 | likely_pathogenic | 0.7991 | pathogenic | -2.178 | Highly Destabilizing | 0.688 | D | 0.636 | neutral | None | None | None | None | N |
I/C | 0.9328 | likely_pathogenic | 0.9124 | pathogenic | -1.589 | Destabilizing | 0.991 | D | 0.779 | deleterious | None | None | None | None | N |
I/D | 0.9974 | likely_pathogenic | 0.9974 | pathogenic | -2.623 | Highly Destabilizing | 0.991 | D | 0.839 | deleterious | None | None | None | None | N |
I/E | 0.9921 | likely_pathogenic | 0.9925 | pathogenic | -2.288 | Highly Destabilizing | 0.991 | D | 0.819 | deleterious | None | None | None | None | N |
I/F | 0.5432 | ambiguous | 0.4614 | ambiguous | -1.309 | Destabilizing | 0.801 | D | 0.657 | neutral | N | 0.505013708 | None | None | N |
I/G | 0.9846 | likely_pathogenic | 0.9797 | pathogenic | -2.807 | Highly Destabilizing | 0.971 | D | 0.809 | deleterious | None | None | None | None | N |
I/H | 0.9869 | likely_pathogenic | 0.9877 | pathogenic | -2.718 | Highly Destabilizing | 0.998 | D | 0.845 | deleterious | None | None | None | None | N |
I/K | 0.975 | likely_pathogenic | 0.9798 | pathogenic | -1.437 | Destabilizing | 0.915 | D | 0.809 | deleterious | None | None | None | None | N |
I/L | 0.1411 | likely_benign | 0.1131 | benign | -0.292 | Destabilizing | 0.002 | N | 0.245 | neutral | N | 0.237848741 | None | None | N |
I/M | 0.2004 | likely_benign | 0.1631 | benign | -0.619 | Destabilizing | 0.934 | D | 0.646 | neutral | N | 0.46496683 | None | None | N |
I/N | 0.9667 | likely_pathogenic | 0.9685 | pathogenic | -2.132 | Highly Destabilizing | 0.989 | D | 0.849 | deleterious | N | 0.504850159 | None | None | N |
I/P | 0.9953 | likely_pathogenic | 0.9955 | pathogenic | -0.91 | Destabilizing | 0.991 | D | 0.841 | deleterious | None | None | None | None | N |
I/Q | 0.9804 | likely_pathogenic | 0.9815 | pathogenic | -1.707 | Destabilizing | 0.991 | D | 0.849 | deleterious | None | None | None | None | N |
I/R | 0.9527 | likely_pathogenic | 0.9623 | pathogenic | -1.774 | Destabilizing | 0.974 | D | 0.841 | deleterious | None | None | None | None | N |
I/S | 0.9527 | likely_pathogenic | 0.9457 | pathogenic | -2.743 | Highly Destabilizing | 0.891 | D | 0.758 | deleterious | N | 0.504850159 | None | None | N |
I/T | 0.9372 | likely_pathogenic | 0.912 | pathogenic | -2.221 | Highly Destabilizing | 0.801 | D | 0.68 | prob.neutral | N | 0.504850159 | None | None | N |
I/V | 0.1348 | likely_benign | 0.1009 | benign | -0.91 | Destabilizing | 0.022 | N | 0.216 | neutral | N | 0.505013708 | None | None | N |
I/W | 0.9854 | likely_pathogenic | 0.9835 | pathogenic | -1.66 | Destabilizing | 0.998 | D | 0.839 | deleterious | None | None | None | None | N |
I/Y | 0.9314 | likely_pathogenic | 0.9298 | pathogenic | -1.392 | Destabilizing | 0.974 | D | 0.768 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.