Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14559 | 43900;43901;43902 | chr2:178632219;178632218;178632217 | chr2:179496946;179496945;179496944 |
N2AB | 12918 | 38977;38978;38979 | chr2:178632219;178632218;178632217 | chr2:179496946;179496945;179496944 |
N2A | 11991 | 36196;36197;36198 | chr2:178632219;178632218;178632217 | chr2:179496946;179496945;179496944 |
N2B | 5494 | 16705;16706;16707 | chr2:178632219;178632218;178632217 | chr2:179496946;179496945;179496944 |
Novex-1 | 5619 | 17080;17081;17082 | chr2:178632219;178632218;178632217 | chr2:179496946;179496945;179496944 |
Novex-2 | 5686 | 17281;17282;17283 | chr2:178632219;178632218;178632217 | chr2:179496946;179496945;179496944 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.773 | D | 0.309 | 0.323 | 0.336647302497 | gnomAD-4.0.0 | 1.60607E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.45645E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1084 | likely_benign | 0.092 | benign | -0.592 | Destabilizing | 0.003 | N | 0.146 | neutral | N | 0.508607416 | None | None | N |
S/C | 0.1325 | likely_benign | 0.1287 | benign | -0.452 | Destabilizing | 0.928 | D | 0.347 | neutral | D | 0.562697157 | None | None | N |
S/D | 0.3572 | ambiguous | 0.2899 | benign | -0.126 | Destabilizing | 0.241 | N | 0.311 | neutral | None | None | None | None | N |
S/E | 0.5457 | ambiguous | 0.4682 | ambiguous | -0.183 | Destabilizing | 0.388 | N | 0.313 | neutral | None | None | None | None | N |
S/F | 0.2838 | likely_benign | 0.2221 | benign | -0.956 | Destabilizing | 0.773 | D | 0.406 | neutral | D | 0.560940898 | None | None | N |
S/G | 0.1075 | likely_benign | 0.0934 | benign | -0.772 | Destabilizing | 0.116 | N | 0.342 | neutral | None | None | None | None | N |
S/H | 0.3262 | likely_benign | 0.2885 | benign | -1.266 | Destabilizing | 0.818 | D | 0.349 | neutral | None | None | None | None | N |
S/I | 0.2945 | likely_benign | 0.2418 | benign | -0.237 | Destabilizing | 0.527 | D | 0.36 | neutral | None | None | None | None | N |
S/K | 0.56 | ambiguous | 0.4796 | ambiguous | -0.695 | Destabilizing | 0.388 | N | 0.309 | neutral | None | None | None | None | N |
S/L | 0.1274 | likely_benign | 0.1078 | benign | -0.237 | Destabilizing | 0.241 | N | 0.36 | neutral | None | None | None | None | N |
S/M | 0.2682 | likely_benign | 0.2307 | benign | 0.086 | Stabilizing | 0.818 | D | 0.347 | neutral | None | None | None | None | N |
S/N | 0.1376 | likely_benign | 0.1113 | benign | -0.518 | Destabilizing | 0.002 | N | 0.228 | neutral | None | None | None | None | N |
S/P | 0.644 | likely_pathogenic | 0.5985 | pathogenic | -0.324 | Destabilizing | 0.773 | D | 0.309 | neutral | D | 0.561869691 | None | None | N |
S/Q | 0.5073 | ambiguous | 0.442 | ambiguous | -0.774 | Destabilizing | 0.818 | D | 0.354 | neutral | None | None | None | None | N |
S/R | 0.4434 | ambiguous | 0.3751 | ambiguous | -0.475 | Destabilizing | 0.69 | D | 0.316 | neutral | None | None | None | None | N |
S/T | 0.0837 | likely_benign | 0.0791 | benign | -0.604 | Destabilizing | None | N | 0.121 | neutral | N | 0.421487105 | None | None | N |
S/V | 0.2967 | likely_benign | 0.2408 | benign | -0.324 | Destabilizing | 0.241 | N | 0.359 | neutral | None | None | None | None | N |
S/W | 0.4323 | ambiguous | 0.3721 | ambiguous | -0.906 | Destabilizing | 0.981 | D | 0.482 | neutral | None | None | None | None | N |
S/Y | 0.2337 | likely_benign | 0.1953 | benign | -0.658 | Destabilizing | 0.773 | D | 0.413 | neutral | D | 0.561869691 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.