Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14560 | 43903;43904;43905 | chr2:178632216;178632215;178632214 | chr2:179496943;179496942;179496941 |
N2AB | 12919 | 38980;38981;38982 | chr2:178632216;178632215;178632214 | chr2:179496943;179496942;179496941 |
N2A | 11992 | 36199;36200;36201 | chr2:178632216;178632215;178632214 | chr2:179496943;179496942;179496941 |
N2B | 5495 | 16708;16709;16710 | chr2:178632216;178632215;178632214 | chr2:179496943;179496942;179496941 |
Novex-1 | 5620 | 17083;17084;17085 | chr2:178632216;178632215;178632214 | chr2:179496943;179496942;179496941 |
Novex-2 | 5687 | 17284;17285;17286 | chr2:178632216;178632215;178632214 | chr2:179496943;179496942;179496941 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs2059893136 | None | 0.001 | N | 0.18 | 0.174 | 0.278143212241 | gnomAD-4.0.0 | 4.80815E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.41023E-06 | 1.17448E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1723 | likely_benign | 0.1501 | benign | -0.905 | Destabilizing | 0.116 | N | 0.297 | neutral | None | None | None | None | N |
I/C | 0.7293 | likely_pathogenic | 0.6785 | pathogenic | -0.532 | Destabilizing | 0.981 | D | 0.292 | neutral | None | None | None | None | N |
I/D | 0.6373 | likely_pathogenic | 0.5876 | pathogenic | -0.496 | Destabilizing | 0.932 | D | 0.398 | neutral | None | None | None | None | N |
I/E | 0.4548 | ambiguous | 0.4057 | ambiguous | -0.596 | Destabilizing | 0.818 | D | 0.411 | neutral | None | None | None | None | N |
I/F | 0.1652 | likely_benign | 0.1314 | benign | -0.966 | Destabilizing | 0.457 | N | 0.256 | neutral | N | 0.505093023 | None | None | N |
I/G | 0.5468 | ambiguous | 0.4676 | ambiguous | -1.092 | Destabilizing | 0.818 | D | 0.401 | neutral | None | None | None | None | N |
I/H | 0.5152 | ambiguous | 0.4467 | ambiguous | -0.421 | Destabilizing | 0.981 | D | 0.386 | neutral | None | None | None | None | N |
I/K | 0.2322 | likely_benign | 0.1975 | benign | -0.429 | Destabilizing | 0.69 | D | 0.401 | neutral | None | None | None | None | N |
I/L | 0.0828 | likely_benign | 0.0598 | benign | -0.525 | Destabilizing | 0.001 | N | 0.156 | neutral | N | 0.34536699 | None | None | N |
I/M | 0.0817 | likely_benign | 0.0702 | benign | -0.305 | Destabilizing | 0.015 | N | 0.238 | neutral | N | 0.484473219 | None | None | N |
I/N | 0.3163 | likely_benign | 0.2765 | benign | -0.127 | Destabilizing | 0.773 | D | 0.381 | neutral | D | 0.545419883 | None | None | N |
I/P | 0.4402 | ambiguous | 0.3714 | ambiguous | -0.618 | Destabilizing | 0.932 | D | 0.391 | neutral | None | None | None | None | N |
I/Q | 0.3895 | ambiguous | 0.3249 | benign | -0.432 | Destabilizing | 0.818 | D | 0.382 | neutral | None | None | None | None | N |
I/R | 0.1764 | likely_benign | 0.1592 | benign | 0.191 | Stabilizing | 0.69 | D | 0.391 | neutral | None | None | None | None | N |
I/S | 0.2423 | likely_benign | 0.2204 | benign | -0.597 | Destabilizing | 0.627 | D | 0.379 | neutral | N | 0.521204311 | None | None | N |
I/T | 0.1101 | likely_benign | 0.1096 | benign | -0.593 | Destabilizing | 0.324 | N | 0.337 | neutral | D | 0.532071396 | None | None | N |
I/V | 0.0764 | likely_benign | 0.0713 | benign | -0.618 | Destabilizing | 0.001 | N | 0.18 | neutral | N | 0.488711646 | None | None | N |
I/W | 0.6741 | likely_pathogenic | 0.5795 | pathogenic | -0.959 | Destabilizing | 0.981 | D | 0.451 | neutral | None | None | None | None | N |
I/Y | 0.5144 | ambiguous | 0.4304 | ambiguous | -0.699 | Destabilizing | 0.818 | D | 0.283 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.