Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14565 | 43918;43919;43920 | chr2:178632201;178632200;178632199 | chr2:179496928;179496927;179496926 |
N2AB | 12924 | 38995;38996;38997 | chr2:178632201;178632200;178632199 | chr2:179496928;179496927;179496926 |
N2A | 11997 | 36214;36215;36216 | chr2:178632201;178632200;178632199 | chr2:179496928;179496927;179496926 |
N2B | 5500 | 16723;16724;16725 | chr2:178632201;178632200;178632199 | chr2:179496928;179496927;179496926 |
Novex-1 | 5625 | 17098;17099;17100 | chr2:178632201;178632200;178632199 | chr2:179496928;179496927;179496926 |
Novex-2 | 5692 | 17299;17300;17301 | chr2:178632201;178632200;178632199 | chr2:179496928;179496927;179496926 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/P | rs1357364341 | None | 0.856 | D | 0.518 | 0.301 | 0.41337360676 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Q/P | rs1357364341 | None | 0.856 | D | 0.518 | 0.301 | 0.41337360676 | gnomAD-4.0.0 | 6.57644E-06 | None | None | None | None | N | None | 0 | 6.55738E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2669 | likely_benign | 0.2341 | benign | -0.465 | Destabilizing | 0.187 | N | 0.3 | neutral | None | None | None | None | N |
Q/C | 0.7483 | likely_pathogenic | 0.6902 | pathogenic | 0.076 | Stabilizing | 0.965 | D | 0.493 | neutral | None | None | None | None | N |
Q/D | 0.3906 | ambiguous | 0.3453 | ambiguous | -0.915 | Destabilizing | 0.561 | D | 0.362 | neutral | None | None | None | None | N |
Q/E | 0.0904 | likely_benign | 0.0779 | benign | -0.844 | Destabilizing | 0.285 | N | 0.337 | neutral | N | 0.479502863 | None | None | N |
Q/F | 0.6915 | likely_pathogenic | 0.6219 | pathogenic | -0.259 | Destabilizing | 0.561 | D | 0.565 | neutral | None | None | None | None | N |
Q/G | 0.3843 | ambiguous | 0.339 | benign | -0.803 | Destabilizing | 0.561 | D | 0.469 | neutral | None | None | None | None | N |
Q/H | 0.2651 | likely_benign | 0.2267 | benign | -0.865 | Destabilizing | 0.003 | N | 0.229 | neutral | D | 0.593679776 | None | None | N |
Q/I | 0.3182 | likely_benign | 0.2684 | benign | 0.386 | Stabilizing | 0.209 | N | 0.424 | neutral | None | None | None | None | N |
Q/K | 0.095 | likely_benign | 0.0821 | benign | -0.385 | Destabilizing | 0.285 | N | 0.371 | neutral | N | 0.491908951 | None | None | N |
Q/L | 0.1326 | likely_benign | 0.1141 | benign | 0.386 | Stabilizing | None | N | 0.262 | neutral | N | 0.508228296 | None | None | N |
Q/M | 0.3346 | likely_benign | 0.2997 | benign | 0.888 | Stabilizing | 0.047 | N | 0.168 | neutral | None | None | None | None | N |
Q/N | 0.294 | likely_benign | 0.2639 | benign | -0.857 | Destabilizing | 0.561 | D | 0.364 | neutral | None | None | None | None | N |
Q/P | 0.2099 | likely_benign | 0.1838 | benign | 0.134 | Stabilizing | 0.856 | D | 0.518 | neutral | D | 0.548472214 | None | None | N |
Q/R | 0.1241 | likely_benign | 0.1112 | benign | -0.323 | Destabilizing | 0.491 | N | 0.359 | neutral | D | 0.590515243 | None | None | N |
Q/S | 0.309 | likely_benign | 0.2836 | benign | -0.876 | Destabilizing | 0.209 | N | 0.367 | neutral | None | None | None | None | N |
Q/T | 0.2059 | likely_benign | 0.1799 | benign | -0.626 | Destabilizing | 0.007 | N | 0.216 | neutral | None | None | None | None | N |
Q/V | 0.2242 | likely_benign | 0.1933 | benign | 0.134 | Stabilizing | 0.209 | N | 0.31 | neutral | None | None | None | None | N |
Q/W | 0.5243 | ambiguous | 0.4855 | ambiguous | -0.199 | Destabilizing | 0.991 | D | 0.501 | neutral | None | None | None | None | N |
Q/Y | 0.4987 | ambiguous | 0.4527 | ambiguous | 0.054 | Stabilizing | 0.39 | N | 0.523 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.