Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14566 | 43921;43922;43923 | chr2:178632198;178632197;178632196 | chr2:179496925;179496924;179496923 |
N2AB | 12925 | 38998;38999;39000 | chr2:178632198;178632197;178632196 | chr2:179496925;179496924;179496923 |
N2A | 11998 | 36217;36218;36219 | chr2:178632198;178632197;178632196 | chr2:179496925;179496924;179496923 |
N2B | 5501 | 16726;16727;16728 | chr2:178632198;178632197;178632196 | chr2:179496925;179496924;179496923 |
Novex-1 | 5626 | 17101;17102;17103 | chr2:178632198;178632197;178632196 | chr2:179496925;179496924;179496923 |
Novex-2 | 5693 | 17302;17303;17304 | chr2:178632198;178632197;178632196 | chr2:179496925;179496924;179496923 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs1415295161 | None | 0.993 | D | 0.539 | 0.634 | 0.711098882349 | gnomAD-4.0.0 | 1.30414E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.53222E-05 | 0 | 3.32325E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9658 | likely_pathogenic | 0.9615 | pathogenic | -2.672 | Highly Destabilizing | 0.999 | D | 0.774 | deleterious | None | None | None | None | N |
I/C | 0.9683 | likely_pathogenic | 0.9664 | pathogenic | -1.797 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
I/D | 0.9972 | likely_pathogenic | 0.9976 | pathogenic | -3.391 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
I/E | 0.9914 | likely_pathogenic | 0.9924 | pathogenic | -3.052 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
I/F | 0.3818 | ambiguous | 0.2777 | benign | -1.633 | Destabilizing | 1.0 | D | 0.821 | deleterious | D | 0.648170235 | None | None | N |
I/G | 0.9892 | likely_pathogenic | 0.9886 | pathogenic | -3.291 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
I/H | 0.9818 | likely_pathogenic | 0.9795 | pathogenic | -3.099 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
I/K | 0.9821 | likely_pathogenic | 0.9824 | pathogenic | -2.053 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
I/L | 0.2956 | likely_benign | 0.2595 | benign | -0.796 | Destabilizing | 0.993 | D | 0.539 | neutral | D | 0.686387003 | None | None | N |
I/M | 0.3298 | likely_benign | 0.2676 | benign | -0.996 | Destabilizing | 1.0 | D | 0.776 | deleterious | D | 0.685183746 | None | None | N |
I/N | 0.9574 | likely_pathogenic | 0.9579 | pathogenic | -2.855 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | D | 0.685183746 | None | None | N |
I/P | 0.9937 | likely_pathogenic | 0.9952 | pathogenic | -1.415 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
I/Q | 0.9849 | likely_pathogenic | 0.9849 | pathogenic | -2.433 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
I/R | 0.9692 | likely_pathogenic | 0.9691 | pathogenic | -2.253 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
I/S | 0.9689 | likely_pathogenic | 0.9697 | pathogenic | -3.348 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | D | 0.685183746 | None | None | N |
I/T | 0.9583 | likely_pathogenic | 0.9516 | pathogenic | -2.834 | Highly Destabilizing | 1.0 | D | 0.831 | deleterious | D | 0.685183746 | None | None | N |
I/V | 0.1734 | likely_benign | 0.159 | benign | -1.415 | Destabilizing | 0.993 | D | 0.479 | neutral | D | 0.573254879 | None | None | N |
I/W | 0.9671 | likely_pathogenic | 0.9518 | pathogenic | -1.999 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
I/Y | 0.7888 | likely_pathogenic | 0.7117 | pathogenic | -1.816 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.