Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14572 | 43939;43940;43941 | chr2:178632180;178632179;178632178 | chr2:179496907;179496906;179496905 |
N2AB | 12931 | 39016;39017;39018 | chr2:178632180;178632179;178632178 | chr2:179496907;179496906;179496905 |
N2A | 12004 | 36235;36236;36237 | chr2:178632180;178632179;178632178 | chr2:179496907;179496906;179496905 |
N2B | 5507 | 16744;16745;16746 | chr2:178632180;178632179;178632178 | chr2:179496907;179496906;179496905 |
Novex-1 | 5632 | 17119;17120;17121 | chr2:178632180;178632179;178632178 | chr2:179496907;179496906;179496905 |
Novex-2 | 5699 | 17320;17321;17322 | chr2:178632180;178632179;178632178 | chr2:179496907;179496906;179496905 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/W | None | None | 0.998 | D | 0.707 | 0.578 | 0.821373730238 | gnomAD-4.0.0 | 1.60464E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.89236E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3053 | likely_benign | 0.2345 | benign | -0.285 | Destabilizing | 0.716 | D | 0.582 | neutral | D | 0.687934514 | None | None | I |
G/C | 0.504 | ambiguous | 0.4586 | ambiguous | -0.967 | Destabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | I |
G/D | 0.1749 | likely_benign | 0.1265 | benign | -0.699 | Destabilizing | 0.046 | N | 0.361 | neutral | None | None | None | None | I |
G/E | 0.2596 | likely_benign | 0.1831 | benign | -0.861 | Destabilizing | 0.035 | N | 0.417 | neutral | D | 0.575803045 | None | None | I |
G/F | 0.8141 | likely_pathogenic | 0.7232 | pathogenic | -1.045 | Destabilizing | 0.998 | D | 0.737 | prob.delet. | None | None | None | None | I |
G/H | 0.5816 | likely_pathogenic | 0.4743 | ambiguous | -0.357 | Destabilizing | 0.994 | D | 0.731 | prob.delet. | None | None | None | None | I |
G/I | 0.6782 | likely_pathogenic | 0.5502 | ambiguous | -0.519 | Destabilizing | 0.994 | D | 0.731 | prob.delet. | None | None | None | None | I |
G/K | 0.6319 | likely_pathogenic | 0.4958 | ambiguous | -0.76 | Destabilizing | 0.921 | D | 0.699 | prob.neutral | None | None | None | None | I |
G/L | 0.7393 | likely_pathogenic | 0.6287 | pathogenic | -0.519 | Destabilizing | 0.959 | D | 0.699 | prob.neutral | None | None | None | None | I |
G/M | 0.7643 | likely_pathogenic | 0.6541 | pathogenic | -0.647 | Destabilizing | 0.998 | D | 0.725 | prob.delet. | None | None | None | None | I |
G/N | 0.2875 | likely_benign | 0.2058 | benign | -0.449 | Destabilizing | 0.959 | D | 0.681 | prob.neutral | None | None | None | None | I |
G/P | 0.964 | likely_pathogenic | 0.9367 | pathogenic | -0.414 | Destabilizing | 0.979 | D | 0.705 | prob.neutral | None | None | None | None | I |
G/Q | 0.502 | ambiguous | 0.3841 | ambiguous | -0.735 | Destabilizing | 0.921 | D | 0.699 | prob.neutral | None | None | None | None | I |
G/R | 0.5026 | ambiguous | 0.3951 | ambiguous | -0.288 | Destabilizing | 0.946 | D | 0.71 | prob.delet. | D | 0.625472351 | None | None | I |
G/S | 0.1725 | likely_benign | 0.1368 | benign | -0.576 | Destabilizing | 0.769 | D | 0.65 | neutral | None | None | None | None | I |
G/T | 0.4082 | ambiguous | 0.2944 | benign | -0.674 | Destabilizing | 0.959 | D | 0.692 | prob.neutral | None | None | None | None | I |
G/V | 0.5223 | ambiguous | 0.4084 | ambiguous | -0.414 | Destabilizing | 0.946 | D | 0.688 | prob.neutral | D | 0.686817093 | None | None | I |
G/W | 0.6726 | likely_pathogenic | 0.5949 | pathogenic | -1.149 | Destabilizing | 0.998 | D | 0.707 | prob.neutral | D | 0.686817093 | None | None | I |
G/Y | 0.6593 | likely_pathogenic | 0.549 | ambiguous | -0.835 | Destabilizing | 0.998 | D | 0.737 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.