Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14574 | 43945;43946;43947 | chr2:178632174;178632173;178632172 | chr2:179496901;179496900;179496899 |
N2AB | 12933 | 39022;39023;39024 | chr2:178632174;178632173;178632172 | chr2:179496901;179496900;179496899 |
N2A | 12006 | 36241;36242;36243 | chr2:178632174;178632173;178632172 | chr2:179496901;179496900;179496899 |
N2B | 5509 | 16750;16751;16752 | chr2:178632174;178632173;178632172 | chr2:179496901;179496900;179496899 |
Novex-1 | 5634 | 17125;17126;17127 | chr2:178632174;178632173;178632172 | chr2:179496901;179496900;179496899 |
Novex-2 | 5701 | 17326;17327;17328 | chr2:178632174;178632173;178632172 | chr2:179496901;179496900;179496899 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.505 | N | 0.645 | 0.147 | 0.238096912614 | gnomAD-4.0.0 | 1.60748E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88386E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.083 | likely_benign | 0.0774 | benign | -0.686 | Destabilizing | 0.004 | N | 0.35 | neutral | None | None | None | None | N |
S/C | 0.1261 | likely_benign | 0.1339 | benign | -0.461 | Destabilizing | 0.965 | D | 0.693 | prob.neutral | D | 0.551611821 | None | None | N |
S/D | 0.4517 | ambiguous | 0.4112 | ambiguous | 0.123 | Stabilizing | 0.575 | D | 0.627 | neutral | None | None | None | None | N |
S/E | 0.5069 | ambiguous | 0.4462 | ambiguous | 0.106 | Stabilizing | 0.575 | D | 0.631 | neutral | None | None | None | None | N |
S/F | 0.1705 | likely_benign | 0.1601 | benign | -0.895 | Destabilizing | 0.906 | D | 0.783 | deleterious | None | None | None | None | N |
S/G | 0.139 | likely_benign | 0.1346 | benign | -0.917 | Destabilizing | 0.338 | N | 0.642 | neutral | D | 0.547333665 | None | None | N |
S/H | 0.3231 | likely_benign | 0.3244 | benign | -1.299 | Destabilizing | 0.991 | D | 0.693 | prob.neutral | None | None | None | None | N |
S/I | 0.1495 | likely_benign | 0.1334 | benign | -0.186 | Destabilizing | 0.642 | D | 0.765 | deleterious | N | 0.50414849 | None | None | N |
S/K | 0.6309 | likely_pathogenic | 0.59 | pathogenic | -0.603 | Destabilizing | 0.575 | D | 0.634 | neutral | None | None | None | None | N |
S/L | 0.1198 | likely_benign | 0.113 | benign | -0.186 | Destabilizing | 0.404 | N | 0.742 | deleterious | None | None | None | None | N |
S/M | 0.238 | likely_benign | 0.2191 | benign | -0.02 | Destabilizing | 0.973 | D | 0.697 | prob.neutral | None | None | None | None | N |
S/N | 0.1624 | likely_benign | 0.1563 | benign | -0.483 | Destabilizing | 0.505 | D | 0.645 | neutral | N | 0.497452452 | None | None | N |
S/P | 0.5088 | ambiguous | 0.5076 | ambiguous | -0.319 | Destabilizing | 0.906 | D | 0.705 | prob.neutral | None | None | None | None | N |
S/Q | 0.5024 | ambiguous | 0.4725 | ambiguous | -0.625 | Destabilizing | 0.906 | D | 0.659 | neutral | None | None | None | None | N |
S/R | 0.5021 | ambiguous | 0.4744 | ambiguous | -0.469 | Destabilizing | 0.782 | D | 0.717 | prob.delet. | N | 0.504373671 | None | None | N |
S/T | 0.0791 | likely_benign | 0.0718 | benign | -0.56 | Destabilizing | 0.001 | N | 0.313 | neutral | N | 0.466852122 | None | None | N |
S/V | 0.1618 | likely_benign | 0.1449 | benign | -0.319 | Destabilizing | 0.404 | N | 0.752 | deleterious | None | None | None | None | N |
S/W | 0.3288 | likely_benign | 0.3241 | benign | -0.854 | Destabilizing | 0.991 | D | 0.749 | deleterious | None | None | None | None | N |
S/Y | 0.1637 | likely_benign | 0.1572 | benign | -0.598 | Destabilizing | 0.906 | D | 0.784 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.