Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14579 | 43960;43961;43962 | chr2:178632159;178632158;178632157 | chr2:179496886;179496885;179496884 |
N2AB | 12938 | 39037;39038;39039 | chr2:178632159;178632158;178632157 | chr2:179496886;179496885;179496884 |
N2A | 12011 | 36256;36257;36258 | chr2:178632159;178632158;178632157 | chr2:179496886;179496885;179496884 |
N2B | 5514 | 16765;16766;16767 | chr2:178632159;178632158;178632157 | chr2:179496886;179496885;179496884 |
Novex-1 | 5639 | 17140;17141;17142 | chr2:178632159;178632158;178632157 | chr2:179496886;179496885;179496884 |
Novex-2 | 5706 | 17341;17342;17343 | chr2:178632159;178632158;178632157 | chr2:179496886;179496885;179496884 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | D | 0.801 | 0.866 | 0.925466202161 | gnomAD-4.0.0 | 6.91713E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.05754E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9559 | likely_pathogenic | 0.9566 | pathogenic | -3.057 | Highly Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
L/C | 0.9488 | likely_pathogenic | 0.9518 | pathogenic | -2.541 | Highly Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
L/D | 0.9987 | likely_pathogenic | 0.999 | pathogenic | -3.702 | Highly Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
L/E | 0.9918 | likely_pathogenic | 0.9935 | pathogenic | -3.394 | Highly Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
L/F | 0.7508 | likely_pathogenic | 0.7853 | pathogenic | -1.757 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | D | 0.725847472 | None | None | N |
L/G | 0.9868 | likely_pathogenic | 0.9889 | pathogenic | -3.663 | Highly Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
L/H | 0.9847 | likely_pathogenic | 0.9894 | pathogenic | -3.216 | Highly Destabilizing | 1.0 | D | 0.787 | deleterious | D | 0.725847472 | None | None | N |
L/I | 0.2951 | likely_benign | 0.3338 | benign | -1.236 | Destabilizing | 0.999 | D | 0.529 | neutral | D | 0.727544819 | None | None | N |
L/K | 0.9834 | likely_pathogenic | 0.9893 | pathogenic | -2.322 | Highly Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
L/M | 0.3927 | ambiguous | 0.4133 | ambiguous | -1.53 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
L/N | 0.9925 | likely_pathogenic | 0.9941 | pathogenic | -2.982 | Highly Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
L/P | 0.9952 | likely_pathogenic | 0.9962 | pathogenic | -1.834 | Destabilizing | 1.0 | D | 0.801 | deleterious | D | 0.725755222 | None | None | N |
L/Q | 0.9756 | likely_pathogenic | 0.982 | pathogenic | -2.671 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
L/R | 0.9724 | likely_pathogenic | 0.9798 | pathogenic | -2.239 | Highly Destabilizing | 1.0 | D | 0.801 | deleterious | D | 0.726895652 | None | None | N |
L/S | 0.9935 | likely_pathogenic | 0.9949 | pathogenic | -3.603 | Highly Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
L/T | 0.9742 | likely_pathogenic | 0.9798 | pathogenic | -3.133 | Highly Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
L/V | 0.3911 | ambiguous | 0.4345 | ambiguous | -1.834 | Destabilizing | 0.999 | D | 0.533 | neutral | D | 0.629612073 | None | None | N |
L/W | 0.9564 | likely_pathogenic | 0.9718 | pathogenic | -2.165 | Highly Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
L/Y | 0.9581 | likely_pathogenic | 0.9704 | pathogenic | -2.006 | Highly Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.