Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14582 | 43969;43970;43971 | chr2:178632150;178632149;178632148 | chr2:179496877;179496876;179496875 |
N2AB | 12941 | 39046;39047;39048 | chr2:178632150;178632149;178632148 | chr2:179496877;179496876;179496875 |
N2A | 12014 | 36265;36266;36267 | chr2:178632150;178632149;178632148 | chr2:179496877;179496876;179496875 |
N2B | 5517 | 16774;16775;16776 | chr2:178632150;178632149;178632148 | chr2:179496877;179496876;179496875 |
Novex-1 | 5642 | 17149;17150;17151 | chr2:178632150;178632149;178632148 | chr2:179496877;179496876;179496875 |
Novex-2 | 5709 | 17350;17351;17352 | chr2:178632150;178632149;178632148 | chr2:179496877;179496876;179496875 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | rs2059886153 | None | 0.996 | N | 0.67 | 0.506 | 0.816327850401 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/R | rs2059886153 | None | 0.996 | N | 0.67 | 0.506 | 0.816327850401 | gnomAD-4.0.0 | 6.57367E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47072E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.26 | likely_benign | 0.2286 | benign | -0.863 | Destabilizing | 0.944 | D | 0.579 | neutral | None | None | None | None | I |
L/C | 0.6127 | likely_pathogenic | 0.636 | pathogenic | -0.606 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | I |
L/D | 0.6865 | likely_pathogenic | 0.6626 | pathogenic | -0.436 | Destabilizing | 0.997 | D | 0.703 | prob.neutral | None | None | None | None | I |
L/E | 0.2809 | likely_benign | 0.2471 | benign | -0.516 | Destabilizing | 0.997 | D | 0.688 | prob.neutral | None | None | None | None | I |
L/F | 0.1764 | likely_benign | 0.1666 | benign | -0.757 | Destabilizing | 0.978 | D | 0.662 | neutral | D | 0.542699484 | None | None | I |
L/G | 0.6167 | likely_pathogenic | 0.6062 | pathogenic | -1.065 | Destabilizing | 0.992 | D | 0.673 | neutral | None | None | None | None | I |
L/H | 0.2644 | likely_benign | 0.2572 | benign | -0.311 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | D | 0.541657077 | None | None | I |
L/I | 0.0841 | likely_benign | 0.0658 | benign | -0.439 | Destabilizing | 0.085 | N | 0.301 | neutral | N | 0.478048025 | None | None | I |
L/K | 0.2319 | likely_benign | 0.2146 | benign | -0.553 | Destabilizing | 0.992 | D | 0.627 | neutral | None | None | None | None | I |
L/M | 0.1275 | likely_benign | 0.117 | benign | -0.41 | Destabilizing | 0.983 | D | 0.667 | neutral | None | None | None | None | I |
L/N | 0.439 | ambiguous | 0.4047 | ambiguous | -0.291 | Destabilizing | 0.997 | D | 0.706 | prob.neutral | None | None | None | None | I |
L/P | 0.6919 | likely_pathogenic | 0.7793 | pathogenic | -0.547 | Destabilizing | 0.996 | D | 0.705 | prob.neutral | D | 0.542699484 | None | None | I |
L/Q | 0.1454 | likely_benign | 0.1422 | benign | -0.535 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | I |
L/R | 0.1817 | likely_benign | 0.1761 | benign | 0.059 | Stabilizing | 0.996 | D | 0.67 | neutral | N | 0.486591784 | None | None | I |
L/S | 0.256 | likely_benign | 0.2348 | benign | -0.759 | Destabilizing | 0.992 | D | 0.619 | neutral | None | None | None | None | I |
L/T | 0.1803 | likely_benign | 0.1536 | benign | -0.731 | Destabilizing | 0.983 | D | 0.611 | neutral | None | None | None | None | I |
L/V | 0.1017 | likely_benign | 0.084 | benign | -0.547 | Destabilizing | 0.476 | N | 0.517 | neutral | N | 0.497969762 | None | None | I |
L/W | 0.2762 | likely_benign | 0.3026 | benign | -0.77 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | I |
L/Y | 0.4583 | ambiguous | 0.4581 | ambiguous | -0.539 | Destabilizing | 0.992 | D | 0.683 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.