Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14586 | 43981;43982;43983 | chr2:178631292;178631291;178631290 | chr2:179496019;179496018;179496017 |
N2AB | 12945 | 39058;39059;39060 | chr2:178631292;178631291;178631290 | chr2:179496019;179496018;179496017 |
N2A | 12018 | 36277;36278;36279 | chr2:178631292;178631291;178631290 | chr2:179496019;179496018;179496017 |
N2B | 5521 | 16786;16787;16788 | chr2:178631292;178631291;178631290 | chr2:179496019;179496018;179496017 |
Novex-1 | 5646 | 17161;17162;17163 | chr2:178631292;178631291;178631290 | chr2:179496019;179496018;179496017 |
Novex-2 | 5713 | 17362;17363;17364 | chr2:178631292;178631291;178631290 | chr2:179496019;179496018;179496017 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs2059766641 | None | 0.98 | D | 0.635 | 0.56 | 0.564208378351 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/A | rs2059766641 | None | 0.98 | D | 0.635 | 0.56 | 0.564208378351 | gnomAD-4.0.0 | 5.17106E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.62015E-06 | 0 | 0 |
P/T | None | None | 0.98 | D | 0.69 | 0.561 | 0.761402108219 | gnomAD-4.0.0 | 1.60865E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.97714E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1769 | likely_benign | 0.1614 | benign | -1.261 | Destabilizing | 0.98 | D | 0.635 | neutral | D | 0.64362078 | None | None | N |
P/C | 0.7866 | likely_pathogenic | 0.7999 | pathogenic | -0.71 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
P/D | 0.8662 | likely_pathogenic | 0.8898 | pathogenic | -0.741 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
P/E | 0.7534 | likely_pathogenic | 0.7724 | pathogenic | -0.76 | Destabilizing | 0.999 | D | 0.678 | prob.neutral | None | None | None | None | N |
P/F | 0.8742 | likely_pathogenic | 0.8798 | pathogenic | -1.008 | Destabilizing | 0.996 | D | 0.711 | prob.delet. | None | None | None | None | N |
P/G | 0.7584 | likely_pathogenic | 0.7832 | pathogenic | -1.557 | Destabilizing | 0.999 | D | 0.658 | neutral | None | None | None | None | N |
P/H | 0.6101 | likely_pathogenic | 0.6449 | pathogenic | -1.071 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | N |
P/I | 0.5517 | ambiguous | 0.4833 | ambiguous | -0.565 | Destabilizing | 0.971 | D | 0.695 | prob.neutral | None | None | None | None | N |
P/K | 0.8073 | likely_pathogenic | 0.8341 | pathogenic | -0.929 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | N |
P/L | 0.2656 | likely_benign | 0.2482 | benign | -0.565 | Destabilizing | 0.135 | N | 0.607 | neutral | D | 0.681556648 | None | None | N |
P/M | 0.7208 | likely_pathogenic | 0.7122 | pathogenic | -0.383 | Destabilizing | 0.996 | D | 0.671 | neutral | None | None | None | None | N |
P/N | 0.796 | likely_pathogenic | 0.809 | pathogenic | -0.642 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
P/Q | 0.6165 | likely_pathogenic | 0.6412 | pathogenic | -0.813 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | D | 0.754613751 | None | None | N |
P/R | 0.5807 | likely_pathogenic | 0.6186 | pathogenic | -0.438 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | D | 0.754613751 | None | None | N |
P/S | 0.3647 | ambiguous | 0.3771 | ambiguous | -1.187 | Destabilizing | 0.997 | D | 0.69 | prob.neutral | D | 0.755415398 | None | None | N |
P/T | 0.2427 | likely_benign | 0.2318 | benign | -1.094 | Destabilizing | 0.98 | D | 0.69 | prob.neutral | D | 0.697021499 | None | None | N |
P/V | 0.432 | ambiguous | 0.3771 | ambiguous | -0.761 | Destabilizing | 0.469 | N | 0.621 | neutral | None | None | None | None | N |
P/W | 0.9378 | likely_pathogenic | 0.9482 | pathogenic | -1.165 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
P/Y | 0.8428 | likely_pathogenic | 0.8584 | pathogenic | -0.872 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.