Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14609 | 44050;44051;44052 | chr2:178631223;178631222;178631221 | chr2:179495950;179495949;179495948 |
N2AB | 12968 | 39127;39128;39129 | chr2:178631223;178631222;178631221 | chr2:179495950;179495949;179495948 |
N2A | 12041 | 36346;36347;36348 | chr2:178631223;178631222;178631221 | chr2:179495950;179495949;179495948 |
N2B | 5544 | 16855;16856;16857 | chr2:178631223;178631222;178631221 | chr2:179495950;179495949;179495948 |
Novex-1 | 5669 | 17230;17231;17232 | chr2:178631223;178631222;178631221 | chr2:179495950;179495949;179495948 |
Novex-2 | 5736 | 17431;17432;17433 | chr2:178631223;178631222;178631221 | chr2:179495950;179495949;179495948 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | None | None | 0.005 | N | 0.269 | 0.176 | 0.247322355667 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9092 | likely_pathogenic | 0.9054 | pathogenic | -3.11 | Highly Destabilizing | 0.863 | D | 0.639 | neutral | None | None | None | None | N |
I/C | 0.9753 | likely_pathogenic | 0.978 | pathogenic | -2.475 | Highly Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
I/D | 0.9925 | likely_pathogenic | 0.9947 | pathogenic | -3.473 | Highly Destabilizing | 0.997 | D | 0.809 | deleterious | None | None | None | None | N |
I/E | 0.9851 | likely_pathogenic | 0.9884 | pathogenic | -3.237 | Highly Destabilizing | 0.997 | D | 0.805 | deleterious | None | None | None | None | N |
I/F | 0.7276 | likely_pathogenic | 0.7922 | pathogenic | -1.735 | Destabilizing | 0.976 | D | 0.701 | prob.neutral | N | 0.518181263 | None | None | N |
I/G | 0.9809 | likely_pathogenic | 0.9833 | pathogenic | -3.591 | Highly Destabilizing | 0.997 | D | 0.793 | deleterious | None | None | None | None | N |
I/H | 0.9895 | likely_pathogenic | 0.9928 | pathogenic | -2.801 | Highly Destabilizing | 0.999 | D | 0.792 | deleterious | None | None | None | None | N |
I/K | 0.9715 | likely_pathogenic | 0.978 | pathogenic | -2.213 | Highly Destabilizing | 0.997 | D | 0.797 | deleterious | None | None | None | None | N |
I/L | 0.3173 | likely_benign | 0.2848 | benign | -1.677 | Destabilizing | 0.005 | N | 0.269 | neutral | N | 0.390846717 | None | None | N |
I/M | 0.3303 | likely_benign | 0.3275 | benign | -1.917 | Destabilizing | 0.976 | D | 0.667 | neutral | D | 0.588765359 | None | None | N |
I/N | 0.9005 | likely_pathogenic | 0.9218 | pathogenic | -2.653 | Highly Destabilizing | 0.996 | D | 0.814 | deleterious | D | 0.631399776 | None | None | N |
I/P | 0.9905 | likely_pathogenic | 0.9918 | pathogenic | -2.145 | Highly Destabilizing | 0.997 | D | 0.813 | deleterious | None | None | None | None | N |
I/Q | 0.9837 | likely_pathogenic | 0.9875 | pathogenic | -2.49 | Highly Destabilizing | 0.997 | D | 0.812 | deleterious | None | None | None | None | N |
I/R | 0.9656 | likely_pathogenic | 0.9745 | pathogenic | -1.932 | Destabilizing | 0.997 | D | 0.816 | deleterious | None | None | None | None | N |
I/S | 0.9181 | likely_pathogenic | 0.9299 | pathogenic | -3.255 | Highly Destabilizing | 0.988 | D | 0.759 | deleterious | N | 0.518016493 | None | None | N |
I/T | 0.8267 | likely_pathogenic | 0.7981 | pathogenic | -2.892 | Highly Destabilizing | 0.92 | D | 0.685 | prob.neutral | N | 0.505917299 | None | None | N |
I/V | 0.1737 | likely_benign | 0.1498 | benign | -2.145 | Highly Destabilizing | 0.061 | N | 0.259 | neutral | N | 0.375535235 | None | None | N |
I/W | 0.9922 | likely_pathogenic | 0.9956 | pathogenic | -1.985 | Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
I/Y | 0.959 | likely_pathogenic | 0.9756 | pathogenic | -1.912 | Destabilizing | 0.997 | D | 0.764 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.