Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14610 | 44053;44054;44055 | chr2:178631220;178631219;178631218 | chr2:179495947;179495946;179495945 |
N2AB | 12969 | 39130;39131;39132 | chr2:178631220;178631219;178631218 | chr2:179495947;179495946;179495945 |
N2A | 12042 | 36349;36350;36351 | chr2:178631220;178631219;178631218 | chr2:179495947;179495946;179495945 |
N2B | 5545 | 16858;16859;16860 | chr2:178631220;178631219;178631218 | chr2:179495947;179495946;179495945 |
Novex-1 | 5670 | 17233;17234;17235 | chr2:178631220;178631219;178631218 | chr2:179495947;179495946;179495945 |
Novex-2 | 5737 | 17434;17435;17436 | chr2:178631220;178631219;178631218 | chr2:179495947;179495946;179495945 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | None | None | 1.0 | D | 0.697 | 0.58 | 0.566666267248 | gnomAD-4.0.0 | 1.36913E-06 | None | None | None | None | N | None | 2.98954E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99666E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.3974 | ambiguous | 0.4889 | ambiguous | -0.627 | Destabilizing | 0.998 | D | 0.367 | neutral | None | None | None | None | N |
S/C | 0.6239 | likely_pathogenic | 0.7265 | pathogenic | -0.363 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | D | 0.696257136 | None | None | N |
S/D | 0.9105 | likely_pathogenic | 0.9135 | pathogenic | -0.237 | Destabilizing | 0.999 | D | 0.543 | neutral | None | None | None | None | N |
S/E | 0.9484 | likely_pathogenic | 0.9607 | pathogenic | -0.198 | Destabilizing | 0.999 | D | 0.533 | neutral | None | None | None | None | N |
S/F | 0.9002 | likely_pathogenic | 0.9382 | pathogenic | -0.563 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
S/G | 0.4198 | ambiguous | 0.4788 | ambiguous | -0.929 | Destabilizing | 0.999 | D | 0.434 | neutral | D | 0.638523603 | None | None | N |
S/H | 0.9081 | likely_pathogenic | 0.9268 | pathogenic | -1.31 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
S/I | 0.8126 | likely_pathogenic | 0.8592 | pathogenic | 0.082 | Stabilizing | 1.0 | D | 0.726 | prob.delet. | D | 0.61819684 | None | None | N |
S/K | 0.9889 | likely_pathogenic | 0.9928 | pathogenic | -0.687 | Destabilizing | 0.999 | D | 0.536 | neutral | None | None | None | None | N |
S/L | 0.6102 | likely_pathogenic | 0.7158 | pathogenic | 0.082 | Stabilizing | 1.0 | D | 0.646 | neutral | None | None | None | None | N |
S/M | 0.8286 | likely_pathogenic | 0.866 | pathogenic | 0.202 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
S/N | 0.6308 | likely_pathogenic | 0.595 | pathogenic | -0.715 | Destabilizing | 0.999 | D | 0.508 | neutral | D | 0.546880022 | None | None | N |
S/P | 0.9482 | likely_pathogenic | 0.9705 | pathogenic | -0.118 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
S/Q | 0.9467 | likely_pathogenic | 0.9635 | pathogenic | -0.745 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
S/R | 0.9673 | likely_pathogenic | 0.9811 | pathogenic | -0.662 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | D | 0.578021121 | None | None | N |
S/T | 0.3772 | ambiguous | 0.3768 | ambiguous | -0.678 | Destabilizing | 0.999 | D | 0.398 | neutral | N | 0.501916228 | None | None | N |
S/V | 0.8398 | likely_pathogenic | 0.8712 | pathogenic | -0.118 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
S/W | 0.8947 | likely_pathogenic | 0.937 | pathogenic | -0.617 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
S/Y | 0.8235 | likely_pathogenic | 0.8793 | pathogenic | -0.332 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.