Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1463 | 4612;4613;4614 | chr2:178777797;178777796;178777795 | chr2:179642524;179642523;179642522 |
N2AB | 1463 | 4612;4613;4614 | chr2:178777797;178777796;178777795 | chr2:179642524;179642523;179642522 |
N2A | 1463 | 4612;4613;4614 | chr2:178777797;178777796;178777795 | chr2:179642524;179642523;179642522 |
N2B | 1417 | 4474;4475;4476 | chr2:178777797;178777796;178777795 | chr2:179642524;179642523;179642522 |
Novex-1 | 1417 | 4474;4475;4476 | chr2:178777797;178777796;178777795 | chr2:179642524;179642523;179642522 |
Novex-2 | 1417 | 4474;4475;4476 | chr2:178777797;178777796;178777795 | chr2:179642524;179642523;179642522 |
Novex-3 | 1463 | 4612;4613;4614 | chr2:178777797;178777796;178777795 | chr2:179642524;179642523;179642522 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs2092386861 | None | 1.0 | D | 0.738 | 0.675 | 0.640003636113 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.5808 | likely_pathogenic | 0.5364 | ambiguous | -1.517 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | D | 0.642823462 | None | None | I |
P/C | 0.9899 | likely_pathogenic | 0.989 | pathogenic | -0.972 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
P/D | 0.9966 | likely_pathogenic | 0.9953 | pathogenic | -1.866 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | I |
P/E | 0.9935 | likely_pathogenic | 0.9899 | pathogenic | -1.637 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | I |
P/F | 0.9985 | likely_pathogenic | 0.9979 | pathogenic | -0.835 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
P/G | 0.943 | likely_pathogenic | 0.9357 | pathogenic | -2.021 | Highly Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
P/H | 0.996 | likely_pathogenic | 0.994 | pathogenic | -1.65 | Destabilizing | 1.0 | D | 0.793 | deleterious | D | 0.740556774 | None | None | I |
P/I | 0.982 | likely_pathogenic | 0.9744 | pathogenic | -0.123 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
P/K | 0.9975 | likely_pathogenic | 0.996 | pathogenic | -1.243 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | I |
P/L | 0.8985 | likely_pathogenic | 0.8664 | pathogenic | -0.123 | Destabilizing | 1.0 | D | 0.828 | deleterious | D | 0.526011862 | None | None | I |
P/M | 0.9851 | likely_pathogenic | 0.9794 | pathogenic | -0.195 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | I |
P/N | 0.9944 | likely_pathogenic | 0.9923 | pathogenic | -1.638 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
P/Q | 0.9909 | likely_pathogenic | 0.9863 | pathogenic | -1.428 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
P/R | 0.9942 | likely_pathogenic | 0.991 | pathogenic | -1.226 | Destabilizing | 1.0 | D | 0.833 | deleterious | D | 0.798718311 | None | None | I |
P/S | 0.9493 | likely_pathogenic | 0.9332 | pathogenic | -2.223 | Highly Destabilizing | 1.0 | D | 0.815 | deleterious | D | 0.676659687 | None | None | I |
P/T | 0.9216 | likely_pathogenic | 0.8894 | pathogenic | -1.839 | Destabilizing | 1.0 | D | 0.824 | deleterious | D | 0.640537559 | None | None | I |
P/V | 0.9444 | likely_pathogenic | 0.926 | pathogenic | -0.561 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
P/W | 0.9998 | likely_pathogenic | 0.9996 | pathogenic | -1.279 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | I |
P/Y | 0.9992 | likely_pathogenic | 0.9987 | pathogenic | -0.83 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.