Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14633 | 44122;44123;44124 | chr2:178631151;178631150;178631149 | chr2:179495878;179495877;179495876 |
N2AB | 12992 | 39199;39200;39201 | chr2:178631151;178631150;178631149 | chr2:179495878;179495877;179495876 |
N2A | 12065 | 36418;36419;36420 | chr2:178631151;178631150;178631149 | chr2:179495878;179495877;179495876 |
N2B | 5568 | 16927;16928;16929 | chr2:178631151;178631150;178631149 | chr2:179495878;179495877;179495876 |
Novex-1 | 5693 | 17302;17303;17304 | chr2:178631151;178631150;178631149 | chr2:179495878;179495877;179495876 |
Novex-2 | 5760 | 17503;17504;17505 | chr2:178631151;178631150;178631149 | chr2:179495878;179495877;179495876 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.144 | N | 0.261 | 0.255 | 0.636434440543 | gnomAD-4.0.0 | 6.84391E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99593E-07 | 0 | 0 |
I/V | rs2059751227 | None | 0.677 | N | 0.349 | 0.128 | 0.511848488485 | gnomAD-4.0.0 | 1.36878E-06 | None | None | None | None | N | None | 5.97836E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.713 | likely_pathogenic | 0.6947 | pathogenic | -2.016 | Highly Destabilizing | 0.969 | D | 0.483 | neutral | None | None | None | None | N |
I/C | 0.8796 | likely_pathogenic | 0.8767 | pathogenic | -1.171 | Destabilizing | 1.0 | D | 0.487 | neutral | None | None | None | None | N |
I/D | 0.9372 | likely_pathogenic | 0.9414 | pathogenic | -2.006 | Highly Destabilizing | 0.999 | D | 0.564 | neutral | None | None | None | None | N |
I/E | 0.7966 | likely_pathogenic | 0.7959 | pathogenic | -1.869 | Destabilizing | 0.999 | D | 0.566 | neutral | None | None | None | None | N |
I/F | 0.2222 | likely_benign | 0.2117 | benign | -1.221 | Destabilizing | 0.144 | N | 0.261 | neutral | N | 0.509996316 | None | None | N |
I/G | 0.9057 | likely_pathogenic | 0.9084 | pathogenic | -2.455 | Highly Destabilizing | 0.995 | D | 0.559 | neutral | None | None | None | None | N |
I/H | 0.8272 | likely_pathogenic | 0.8309 | pathogenic | -1.691 | Destabilizing | 1.0 | D | 0.567 | neutral | None | None | None | None | N |
I/K | 0.6745 | likely_pathogenic | 0.7038 | pathogenic | -1.576 | Destabilizing | 0.995 | D | 0.568 | neutral | None | None | None | None | N |
I/L | 0.1772 | likely_benign | 0.1621 | benign | -0.803 | Destabilizing | 0.03 | N | 0.115 | neutral | N | 0.509755779 | None | None | N |
I/M | 0.1428 | likely_benign | 0.132 | benign | -0.615 | Destabilizing | 0.677 | D | 0.343 | neutral | N | 0.513396346 | None | None | N |
I/N | 0.6599 | likely_pathogenic | 0.6784 | pathogenic | -1.695 | Destabilizing | 0.998 | D | 0.571 | neutral | D | 0.761102981 | None | None | N |
I/P | 0.8959 | likely_pathogenic | 0.9098 | pathogenic | -1.183 | Destabilizing | 0.999 | D | 0.568 | neutral | None | None | None | None | N |
I/Q | 0.7032 | likely_pathogenic | 0.7113 | pathogenic | -1.697 | Destabilizing | 0.995 | D | 0.565 | neutral | None | None | None | None | N |
I/R | 0.5753 | likely_pathogenic | 0.6068 | pathogenic | -1.128 | Destabilizing | 0.995 | D | 0.569 | neutral | None | None | None | None | N |
I/S | 0.6582 | likely_pathogenic | 0.661 | pathogenic | -2.308 | Highly Destabilizing | 0.994 | D | 0.522 | neutral | D | 0.60357042 | None | None | N |
I/T | 0.545 | ambiguous | 0.5217 | ambiguous | -2.039 | Highly Destabilizing | 0.979 | D | 0.481 | neutral | D | 0.59869868 | None | None | N |
I/V | 0.1375 | likely_benign | 0.1226 | benign | -1.183 | Destabilizing | 0.677 | D | 0.349 | neutral | N | 0.504548586 | None | None | N |
I/W | 0.8211 | likely_pathogenic | 0.8295 | pathogenic | -1.486 | Destabilizing | 1.0 | D | 0.583 | neutral | None | None | None | None | N |
I/Y | 0.7008 | likely_pathogenic | 0.7096 | pathogenic | -1.191 | Destabilizing | 0.982 | D | 0.507 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.