Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14638 | 44137;44138;44139 | chr2:178631136;178631135;178631134 | chr2:179495863;179495862;179495861 |
N2AB | 12997 | 39214;39215;39216 | chr2:178631136;178631135;178631134 | chr2:179495863;179495862;179495861 |
N2A | 12070 | 36433;36434;36435 | chr2:178631136;178631135;178631134 | chr2:179495863;179495862;179495861 |
N2B | 5573 | 16942;16943;16944 | chr2:178631136;178631135;178631134 | chr2:179495863;179495862;179495861 |
Novex-1 | 5698 | 17317;17318;17319 | chr2:178631136;178631135;178631134 | chr2:179495863;179495862;179495861 |
Novex-2 | 5765 | 17518;17519;17520 | chr2:178631136;178631135;178631134 | chr2:179495863;179495862;179495861 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs878896650 | None | 0.014 | N | 0.265 | 0.106 | 0.181679512989 | gnomAD-4.0.0 | 4.10636E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39758E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6662 | likely_pathogenic | 0.5985 | pathogenic | -0.517 | Destabilizing | 0.86 | D | 0.663 | neutral | None | None | None | None | N |
K/C | 0.8856 | likely_pathogenic | 0.8525 | pathogenic | -0.653 | Destabilizing | 0.998 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/D | 0.7668 | likely_pathogenic | 0.7162 | pathogenic | -0.161 | Destabilizing | 0.978 | D | 0.718 | prob.delet. | None | None | None | None | N |
K/E | 0.2935 | likely_benign | 0.2532 | benign | -0.094 | Destabilizing | 0.822 | D | 0.623 | neutral | D | 0.537723489 | None | None | N |
K/F | 0.8886 | likely_pathogenic | 0.8684 | pathogenic | -0.442 | Destabilizing | 0.998 | D | 0.718 | prob.delet. | None | None | None | None | N |
K/G | 0.6219 | likely_pathogenic | 0.5668 | pathogenic | -0.829 | Destabilizing | 0.956 | D | 0.669 | neutral | None | None | None | None | N |
K/H | 0.5563 | ambiguous | 0.5147 | ambiguous | -1.185 | Destabilizing | 0.994 | D | 0.683 | prob.neutral | None | None | None | None | N |
K/I | 0.6259 | likely_pathogenic | 0.5607 | ambiguous | 0.264 | Stabilizing | 0.978 | D | 0.738 | prob.delet. | None | None | None | None | N |
K/L | 0.5761 | likely_pathogenic | 0.5013 | ambiguous | 0.264 | Stabilizing | 0.956 | D | 0.669 | neutral | None | None | None | None | N |
K/M | 0.3874 | ambiguous | 0.3359 | benign | 0.255 | Stabilizing | 0.997 | D | 0.678 | prob.neutral | D | 0.632341433 | None | None | N |
K/N | 0.5215 | ambiguous | 0.4472 | ambiguous | -0.356 | Destabilizing | 0.942 | D | 0.667 | neutral | N | 0.509549711 | None | None | N |
K/P | 0.8529 | likely_pathogenic | 0.7772 | pathogenic | 0.034 | Stabilizing | 0.993 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/Q | 0.2168 | likely_benign | 0.1883 | benign | -0.569 | Destabilizing | 0.942 | D | 0.673 | neutral | N | 0.500752876 | None | None | N |
K/R | 0.0967 | likely_benign | 0.0873 | benign | -0.47 | Destabilizing | 0.014 | N | 0.265 | neutral | N | 0.511272088 | None | None | N |
K/S | 0.6473 | likely_pathogenic | 0.5762 | pathogenic | -1.033 | Destabilizing | 0.86 | D | 0.657 | neutral | None | None | None | None | N |
K/T | 0.3963 | ambiguous | 0.3336 | benign | -0.78 | Destabilizing | 0.942 | D | 0.683 | prob.neutral | N | 0.491499853 | None | None | N |
K/V | 0.6209 | likely_pathogenic | 0.541 | ambiguous | 0.034 | Stabilizing | 0.978 | D | 0.731 | prob.delet. | None | None | None | None | N |
K/W | 0.8749 | likely_pathogenic | 0.8635 | pathogenic | -0.285 | Destabilizing | 0.998 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/Y | 0.7798 | likely_pathogenic | 0.7573 | pathogenic | 0.034 | Stabilizing | 0.993 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.