Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14661 | 44206;44207;44208 | chr2:178631067;178631066;178631065 | chr2:179495794;179495793;179495792 |
N2AB | 13020 | 39283;39284;39285 | chr2:178631067;178631066;178631065 | chr2:179495794;179495793;179495792 |
N2A | 12093 | 36502;36503;36504 | chr2:178631067;178631066;178631065 | chr2:179495794;179495793;179495792 |
N2B | 5596 | 17011;17012;17013 | chr2:178631067;178631066;178631065 | chr2:179495794;179495793;179495792 |
Novex-1 | 5721 | 17386;17387;17388 | chr2:178631067;178631066;178631065 | chr2:179495794;179495793;179495792 |
Novex-2 | 5788 | 17587;17588;17589 | chr2:178631067;178631066;178631065 | chr2:179495794;179495793;179495792 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs370339661 | -0.02 | 0.997 | N | 0.505 | 0.425 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs370339661 | -0.02 | 0.997 | N | 0.505 | 0.425 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs370339661 | -0.02 | 0.997 | N | 0.505 | 0.425 | None | gnomAD-4.0.0 | 6.57626E-06 | None | None | None | None | N | None | 2.41371E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1382 | likely_benign | 0.1131 | benign | -0.268 | Destabilizing | 0.9 | D | 0.493 | neutral | N | 0.45258781 | None | None | N |
T/C | 0.7691 | likely_pathogenic | 0.7573 | pathogenic | -0.19 | Destabilizing | 1.0 | D | 0.513 | neutral | None | None | None | None | N |
T/D | 0.4888 | ambiguous | 0.4453 | ambiguous | 0.097 | Stabilizing | 0.995 | D | 0.467 | neutral | None | None | None | None | N |
T/E | 0.3958 | ambiguous | 0.3502 | ambiguous | 0.012 | Stabilizing | 0.995 | D | 0.481 | neutral | None | None | None | None | N |
T/F | 0.4406 | ambiguous | 0.4195 | ambiguous | -0.826 | Destabilizing | 0.999 | D | 0.541 | neutral | None | None | None | None | N |
T/G | 0.3986 | ambiguous | 0.3456 | ambiguous | -0.377 | Destabilizing | 0.983 | D | 0.497 | neutral | None | None | None | None | N |
T/H | 0.4472 | ambiguous | 0.4306 | ambiguous | -0.651 | Destabilizing | 1.0 | D | 0.56 | neutral | None | None | None | None | N |
T/I | 0.3548 | ambiguous | 0.3304 | benign | -0.103 | Destabilizing | 0.997 | D | 0.505 | neutral | N | 0.506045346 | None | None | N |
T/K | 0.2448 | likely_benign | 0.2247 | benign | -0.288 | Destabilizing | 0.994 | D | 0.47 | neutral | N | 0.452106788 | None | None | N |
T/L | 0.2123 | likely_benign | 0.1875 | benign | -0.103 | Destabilizing | 0.992 | D | 0.506 | neutral | None | None | None | None | N |
T/M | 0.1392 | likely_benign | 0.1269 | benign | 0.059 | Stabilizing | 1.0 | D | 0.505 | neutral | None | None | None | None | N |
T/N | 0.1847 | likely_benign | 0.1561 | benign | -0.048 | Destabilizing | 0.995 | D | 0.457 | neutral | None | None | None | None | N |
T/P | 0.2431 | likely_benign | 0.2341 | benign | -0.131 | Destabilizing | 0.997 | D | 0.499 | neutral | D | 0.548754144 | None | None | N |
T/Q | 0.3495 | ambiguous | 0.3244 | benign | -0.29 | Destabilizing | 0.998 | D | 0.486 | neutral | None | None | None | None | N |
T/R | 0.2022 | likely_benign | 0.1941 | benign | 0.003 | Stabilizing | 0.997 | D | 0.493 | neutral | N | 0.491651796 | None | None | N |
T/S | 0.174 | likely_benign | 0.142 | benign | -0.238 | Destabilizing | 0.63 | D | 0.259 | neutral | N | 0.440780413 | None | None | N |
T/V | 0.3313 | likely_benign | 0.2914 | benign | -0.131 | Destabilizing | 0.992 | D | 0.477 | neutral | None | None | None | None | N |
T/W | 0.7729 | likely_pathogenic | 0.7823 | pathogenic | -0.858 | Destabilizing | 1.0 | D | 0.624 | neutral | None | None | None | None | N |
T/Y | 0.5125 | ambiguous | 0.5112 | ambiguous | -0.558 | Destabilizing | 0.999 | D | 0.55 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.